Detailed information on CNT30682609


BLAST search results

BLAST vs Swiss-Prot:
sp|P68540|COX1_AEGCO, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30187765Triticum urartuSecale cereale20.6167.8198.87533forward
CNT30437404Triticum urartuAegilops tauschii24.4410099.84632forward
CNT30605231Triticum urartuGossypium raimondii59.9441.4494.521550forward
CNT30205015Triticum urartuHelianthus annuus15.8510092.93410forward
CNT30371457Triticum urartuOryza glumipatula50.5857.2998.71308forward

Expression of CNT30682609

Peptides detected in this lncRNA

>peptide 1 (38 aa)
NRFGYAVQLAIKANLICGPVGQPTNSSNEELISPHLSL*

>peptide 2 (31 aa)
MIYYLIVEMPCQVHLSESEQTNYQIHLSSPA*

>peptide 3 (31 aa)
MSGAPIRIGTNQLPNPPIIAGITIKKIIKKA*

>peptide 4 (61 aa)
MSSPEFARTIPVSPPMVNKKMNPTANNMGVLYCIEPPHMVAIQLKILIPVGTAMIMVAAVK*

>peptide 5 (47 aa)
MKNLFPHTYLYETSFIVRRGFFLAFCLFYRRKFSKSMKGRRALYQPF*

>peptide 6 (45 aa)
MRRGIPESPKKCMGKKVRLTPKKVIQKWIWPKVSGYVRPKILPTQ*

Sequence

>CNT30682609
GGAATCGCTTTGGTTACGCAGTTCAGTTGGCGATAAAAGCCAACCTAATCTGCGGGCCGGTAGGCCAGCCAACTAACTCTTCAAATGAAGAACTTATTTC
CCCACACCTATCTCTATGAAACTTCCTTCATAGTTAGGAGAGGTTTTTTTTTAGCTTTTTGTCTCTTTTACCGCAGGAAGTTCTCCAAAAGTATGAAAGG
CCGGAGGGCTTTGTACCAACCATTCTAGTGTGGTTGGATTCTGTTCAACAGCCCAAGGACTTTCCGCACATTTTTGGTTCTTTCCACTGCTTGAAGTGAT
TGCGACAACTACGAAGAAACGACGAATCCCAACTACGGATATATAAGAACCGAAACTGCTCAGAGCATTCCATCCGGCGTAAGCATCTGGATAATCTGGA
ATGCGACGTGGCATACCCGAAAGCCCTAAGAAATGCATGGGAAAGAAGGTCAGATTAACCCCGAAAAAAGTGATCCAAAAATGGATTTGGCCTAAAGTTT
CAGGATATGTCCGACCAAAGATTTTACCCACCCAATAGTAAAATCCAGCAAATAAAGCAAAAACGGCTCCCATAGAAAGTACATAATGGAAATGTGCAAC
CACATAATAAGTATCATGTAGAGCAATGTCTAGCCCAGAGTTTGCTAGAACTATTCCAGTGAGCCCTCCTATGGTGAACAAAAAGATGAACCCTACAGCA
AATAACATGGGTGTTTTGTATTGTATCGAACCTCCCCACATGGTAGCGATCCAACTAAAGATTTTGATTCCTGTGGGCACAGCTATGATCATGGTAGCTG
CGGTGAAGTAGGCACGCGTATCAACGTCTAAGCCCACAGTAAACATATGATGAGCCCAAACTAGAAATCCAAGAACACCTATACTTATCATGGCATAAAC
CATGCCTAGATACCCGAAGACCGGTTTTCTTGAAAAGGTCGATACGATATGACTAATAATACCAAATCCAGGCAGAATGAGAATATACACCTCTGGATGA
CCGAAGAACCAAAAGAGATGCTGGTATAATATTGGGTCTCCCCCTCCTGCAGGATCAAAAAAGGTTGTATTAAAGTTTCGATCGGTTAATAACATTGTAA
TTGCCCCCGCCAGTACCGGAAGTGATAATAAAAGTAGGAATGCTGTCACTAGAACGGACCACACAAAAAGTGGTAATCTATGCATAGTCATTCCAGGTCC
ACGCATGTTGAAGATAGTTGTTATAAAATTGATAGAACCTAAAATTGATGAAATACCTGATAGATGAAGACTAAAAATTGCTAAATCAACTGCTCCTCCA
GAATGGCTGGTAATACCACTTAAGGGCGGATAGACTGTCCACCCAGTGCCGCTGCCCACTTCTACTAAGGCTGAGCTTAATAGGAGCAAGAGACTTGGTG
GCAACAACCAGAATGATATATTATTTAATCGTGGAAATGCCATGTCAGGTGCACCTATCAGAATCGGAACAAACCAATTACCAAATCCACCTATCATCGC
CGGCATAACCATAAAAAAGATCATTAAAAAAGCATGAGCCGTTATTAAAACATTATAAAGTTGATGATTCCCACCAAGAATTTGATCGCCGGGTCGGGCT
AATTCCATACGAATCAGTACGGAGAAGCATGTGCCCATCACTCCTGCAATGGCACCGAAGATGAAATAGAGAGTCCCAATATCCTTGTGGTTAGTAGAGA
AGAGCCATCGAACCATATTTGTCATTTTTGATTTGAGAAATGAAAACTTTCCTTATCAAAGAGGGGCCAGGGGGCTGGAAGAGAAGAACTTGAATACTAA
ACGCTGGAAGAGAAGAACCTTAATACTAAACCAAGTTTCGGGAACTTCTTGGTGACTTGATTGGTTCCCTTCCCCCAATTTGCAAAGGATGATTCCCGTG
AAGGTGATCTCGATCACCATTCTATGATATTTCTGGATGCTTTTGAGAAGCTTTTCCTTTTACCTAATGCCAGCTACCGACAACTTACTTCATGCTATTA
CTAACACTTATGACTGAGCCGCACTTGCTTTCCAAAAGAAATTGAAACTATCATGCCTGAGACTAGCCAATAGAAGAAAGAGCCACAAGCAAGCCATAGC
AGCATCCTTTTTCTTCGCTTTCTTCAACAATGCGAATCTACCTCACTCCTCATCATAACTCAAATACAAATTCGAGTTCCAAATTGATATTTCCTCACGT
AAGCAATAAAATGTGAAACCAATATTCATCATGAAACTTCAGACACTGATGATTGTGAGGTTCTGGAAGAGAGACGACGTAGGCTGAAAAAAAGTAAACA
GAAAACCACCCCTTAAACTCATTTGCTCAACATTCTTTCCACAGCAACTAGAAAAGTGGAGAAAATCCAATAAGGGGAGGTCCCGGTGAATACAAATCAA
TTGGAAACCTCACCCCGCATTCATGTCTCTAACAAGGCTGTCTAAGCTAAGCGGCCATGGACCCATGGACCCGGGGAATCTGAACCATTAGGTAGAGTTT
CAGCTGAAAGAAAACCAGGTCAATCTTCCGATCGCGAGTCTTTACAAGCTTGAAACAACTTAAGCACAGGCGGGAGTCGCCCCTTT