« Back to Triticum urartu search


Detailed information on CNT30682212


BLAST search results

BLAST vs Swiss-Prot:
sp|P58386|PSAB_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONOSAT000261, E-value = 7e-93

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678731Triticum urartuSetaria viridis10.1697.3893.43335forward
CNT30526965Triticum urartuEucalyptus grandis1.726.0589.2956reverse complement
CNT30617597Triticum urartuSesamum indicum9.8630.1292.62325forward
CNT30202037Triticum urartuPisum sativum64.9965.83882142forward
CNT30712408Triticum urartuGlycine max7.9294.5785.82261forward
CNT3093534Triticum urartuSolanum tuberosum4.5837.1986.09151forward
CNT30194074Triticum urartuSecale cereale29.16100.199.79961forward
CNT30219816Triticum urartuHordeum vulgare60.56100.1598.151996forward
CNT30560220Triticum urartuActinidia chinensis22.7548.2391.33750forward
CNT30368556Triticum urartuSorghum bicolor14.9699.295.94493forward
CNT30152144Triticum urartuPrunus persica5.8390.1486.98192forward
CNT30484006Triticum urartuChara braunii6.7461.1681.98222forward
CNT3057356Triticum urartuAmborella trichopoda60.8383.3386.132005forward
CNT30585620Triticum urartuEchinochloa crusgalli90.1757.9296.572972forward

Expression of CNT30682212

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MIQNFLAKLHETDFRTSIERLLLIAQSEKQKCSDKDVLQVISS*

>peptide 2 (42 aa)
MFPLGQAHRKESENLDLLYRVSNGNSEQIKHLSKVLIQSHVW*

>peptide 3 (45 aa)
MRPKQKYHNYRRALGRHKENYIQNPFYLVLIWNRVHLKRPLLKSM*

>peptide 4 (34 aa)
MSYHPLITYSTPNIRLHFPTEMENDYRNCIVHPE*

>peptide 5 (29 aa)
MTCDACAHKKSRSHPLIVMELCAKFPPVI*

>peptide 6 (38 aa)
MSRLYSLGKYRFDQDLLFWSTKSKHDVVMNIKAQGMES*

>peptide 7 (34 aa)
WRVGALLRGRDCNFSRIFIFSLKLKGETLLLIFF*

Sequence

>CNT30682212
TGGCGTGTAGGTGCACTATTACGCGGTAGGGATTGCAATTTTTCTCGCATTTTCATTTTTTCACTCAAACTCAAGGGAGAAACTTTGCTTCTTATCTTTT
TTTAAAGATTGACGAATCAAATGATATTTCTGTTCTAATTTCTGCCGCTTCTTCTCCCTCTGAATCAAACTTTTTTTTGCCATAATGTGTCGTTGCTATT
ATTACCAAGTATACGGTTCTAATCCTAGATGGAAAAATAAATAGAAAAAGAAATCTAAAAAGGCAGATCCTCCCTCTCTATCAAGAGTAATGAACTAGGT
GTGATACAGTACAAAAAAACAAACTAAATTAACCAAACTTGCCTGATGTTGAGGCAATCAAGAAAGCTGCATAAGTGAATATATAACCCACGGAAAAGTG
AGCTAATCCAACCAATCTTGCTTGCACAACGGAAAGAGCCACGGGCTTATCTCTCCAGCGAATTAAATTAGCTAAAGGTGTGCGTTCATGAGCCCATGCT
AAAGTCTCAATTAATTCCTGCCAATACCCCCGCCAGGAAATTAAGAACATAAATCCAGTAGCCCAAACAAGATGTCCAAATAAGAACATCCACGCCCATA
CCGATAAACTATTCATCCCAAAAGGATTATATCCATTGATAAGTTGTGAAGAGTTTAACCATAGGTAATCTCTTAACCATCCCATCAAATAAGTGGAGGA
TTCATTAAATTGTGAAACGTTGCCCTGCCATAATGTGATATGTTTCCAATGCCAATAAAAAGTAACCCACCCAATGGTATTTAACATCCAGAAAACTGCC
AAATAAAATGCGTCCCAAGCAGAAATATCACAATTACCGCCGCGCCCTGGGCCGTCACAAGGAAAACTATATCCAAAATCCTTTTTATCTGGTATTAATT
TGGAACCGCGTGCATCTAAAGCGCCCTTTACTAAAATCAATGTAGTTGTATGCAAACCTAGAGCAATATCATGATGAACCAAGAAATCCCCAGGTCCTAT
TGTTAAGAAAAGCGAATTACTATTCTCATTAACAGCATTCAACCATCCGGGCAACCATAGGCTTCGACCCGCATTGAAAGCGGGGCCATTCGTTGAAGAT
AAGAGTATATCGAACCCATATGTCGTCTTGCCATGAGCAGATTGTATTCATTGGGCAAATATAGGTTCGATCAAGATTTGCTTTTCTGGAGTACCAAAAG
CAAGCATGACGTTGTTATGAACATAAAGGCCCAAGGTATGGAATCCTAGAAAGAGGCTAGCCCAACTTAAATGAGATATGATAGCTTCTTTATGGTCTAA
CATTCTTGCCAATACATTATCCTCATTCTGTTCCGGATTGTAATCCCTAATGAAAAAAATAGCTCCATGAGCAAAAGCCCCTGTCATGATGAACCCTGCA
ATATATTGGTGATGAGTATATAAAGCAGCTTGAGTAGTAAAGTCTTGTGCTATGAATGCATAAGGAGGTAAAGAGTACATATGTTGAGCTACTAAGGAAG
TAATAACCCCTAAAGAAGCTAGAGCAAGACCTAACTGAAAATGAATCGAATTGTTGATTGTGTCATAAAGGCCCTTATGCCCACGCCCTAATCGACCCCC
CGGAGGAGTATGCGCTTCTAAAAGATCTTTAATACTGTGCCCAATTCCGAAGTTAGTTTGATACATGTGACCGGCAATGAGAAAAATAAATGCAATAGCT
AAATGATGGTGAGCCATATCGGTCAGCCACAAACTTTGTGTTTGTGGATGGAATCCCCCAAGAAGAGTTAGAATGGCAGTTCCCGCTCCTTGAGCGGTAC
CAAATAAATGATTACTCGAATCAGGGTTTTGGGCATAAAGATTCCATTGACCCGTCAAAAGGGGTCCCAACCCCTGGGGATAGGGTAATACATCTAAGAA
ATTATTCCATCGAACGTACTCCCCCCTGGATGCGGGAATAGCAACATGAACTAAATGTCCTGTCCAAGCCAAAGAACTTACCCCGAAAAGTCCTGACAAA
TGATGATTGAGACGAGATTCCGCGTTTTTGAACCACGAAAGGCTTGGTTTCCATTTGGGTTGTAGATGTAACCAACCCGCTATTAAGGACAGCGTAGAAA
GAAATAATAGAAAAAGAGCTCCAGTATAAAGATCCTCATTGGTGCGTAATCCTATTGTATACCACCACTGATAAACTCCAGAATAAGCAATATTCACTGG
ACCAGCAGCACCTCCTCGAGTAAAGGCTTCCACAGCGGGTTGACCAAAATGAGGATCCCAAATCGCATGAGCAATAGGTCTTACGTGTAAAGGATCCTGT
ATCCATGATTCAAAATTTCCTTGCCAAGCTACATGAAACAGATTTCCGGACGTCCATAGAAAGATTATTGCTAATTGCCCAAAGTGAGAAGCAAAAATGT
TCTGATAAAGACGTTCTTCAAGTAATATCATCATGACTTTCGAAATCATGTGCGGTAGCAATACCAAACCAAATACGACGAGTAGTGGGGTCCTGAGCTA
AGCCTTGGCTAAACCTGGGAAATCTTAATTCCATAATGCCTTTCAAATCCTCCTAGCCACTATCCTACTGCAATAATTCTCGCTAAGAAGAATGCCCATG
TCGTGGCAATTCCACCCAGAAGGTAATGGGTTACTCCTACAGCGCGTCCTTGTATAATGCTCAAGGCTCTAGGCTGAGTAGCAGGAGCAACTTTTAATTT
GTTATGAGCCCAAACGATAGATTCAATGAGTTCTTGCCAATAACCACGGCCGCTGAATAAAAACATTAAACTGAAGGCCCAGACAAAATGAGCACCTAAG
AAAAAAAGACCATATGCAGATAATGAAGAACCATAAGACTGAATGACTTGCGATGCCTGTGCCCACAAGAAATCTCGAAGCCACCCATTAATCGTAATGG
AACTCTGTGCAAAGTTTCCCCCTGTAATATGAGTTACCACCCCTTGATCACTTATAGTACCCCAAACATCCGACTGCATTTTCCAACTGAAATGGAAAAT
GACTACCGAAATTGCATTGTACATCCAGAATAAACCTAAGAAAACATGATCCCAGGCGGATACTTGACATGTTCCCCCTCGGCCAGGCCCATCGCAAGGA
AAGCGAAAACCTAGATTTGCTTTATCGGGTATCAAACGGGAACTCCGAGCAAATAAAACACCTTTCAAAAGTATTAATACAGTCACATGTATGGTAAATG
CATGAATGTGATGGACTAAAAAATCTACGGTTCCTAATGGAATAGGTAACAAAGCCACTTTGCCACCTACTGCTACTAACTCGCCGCCTCCCCGCC