Detailed information on CNT30682184


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193237Triticum urartuSecale cereale48.1532.2788.62325forward
CNT30388347Triticum urartuTriticum turgidum50.2270.3399.41339forward
CNT30249088Triticum urartuAvena sativa22.3728.0784.77151forward
CNT30595554Triticum urartuOryza meridionalis1231.0392.5981forward
CNT30369283Triticum urartuOryza glumipatula1220.8892.5981forward

Expression of CNT30682184

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MYRLNHGRFYLGVGLHAWECTCSAHAGRCLHTYKDPRSGSVTWY*

>peptide 2 (51 aa)
MHGSAPALLMLAGAYIHTKTLDQVALHGTRWMDGSIIDMMHARGACMIDDQ*

>peptide 3 (47 aa)
MINDLAAAAGAAAAGAALALGAAAAAVLRRHLHPAGAPAPIHPSLVP*

>peptide 4 (80 aa)
MMYEEREGTYALWVAVAATRRVAPAASTSGYMLQPPQPLPHLQALPQPQLPPQQDIFEVAWDWMEALIGVGFFCASCLLA*

>peptide 5 (64 aa)
MRKEKGRTPCGWRWRRRGGWRRRPRPRGTCCSRRSRCRTCRRCRSRSFLRSKTSSKLLGIGWRP*

Sequence

>CNT30682184
CTGGTCTATAACACAAACACATGTATAGGTTAAACCACGGGAGATTTTATTTAGGGGTCGGTTTACATGCATGGGAGTGCACCTGCTCTGCTCATGCTGG
CAGGTGCTTACATACATACAAAGACCCTCGATCAGGTAGCGTTACATGGTACTAGATGGATGGATGGATCGATCATAGATATGATGCATGCGCGCGGTGC
ATGCATGATCGATGATCAATGATCTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGTGCAGCCGCAGCTGCCGTTCTCCGCCG
CCATCTCCATCCCGCCGGAGCTCCTGCACCCATCCATCCATCCTTAGTCCCATAGCAAGATCAACATATATAGTCATATTACAGCGAGGCGCATGATGTA
TGAGGAAAGAGAAGGGACGTACGCCTTGTGGGTGGCGGTGGCGGCGACGAGGAGGGTGGCGCCGGCGGCCTCGACCTCGGGGTACATGTTGCAGCCGCCG
CAGCCGTTGCCGCACTTGCAGGCGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAAGTTGCTTGGGATTGGATGGAGGCCTTGATTGGTG
TTGGCTTCTTTTGTGCTTCTTGCTTGCTGGCTTGAGTAACAATGGCAGGCAGCGAGGGCTATTTATAGGCGAGTG