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Detailed information on CNT30682011


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 1e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 1e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670969Triticum urartuSetaria viridis99.7985.2899.69973reverse complement
CNT30641383Triticum urartuNymphaea colorata10031.2196.92975forward
CNT30550219Triticum urartuIpomoea triloba10022.4698.67975forward
CNT30702366Triticum urartuQuercus lobata97.7495.6898.11953reverse complement
CNT30632407Triticum urartuVigna unguiculata10036.198.15975reverse complement
CNT30505560Triticum urartuNicotiana attenuata100.144.1497.75976reverse complement
CNT30712072Triticum urartuGlycine max23.0835.4994.67225forward
CNT30637481Triticum urartuCapsicum annuum25.2354.9195.93246forward
CNT3094274Triticum urartuSolanum tuberosum21.7471.8698.58212reverse complement
CNT30221833Triticum urartuHordeum vulgare89.8564.1897.83876forward
CNT30569655Triticum urartuActinidia chinensis100.3127.4697.34978forward
CNT30543278Triticum urartuBrassica napus80.8229.1996.07788forward
CNT30508923Triticum urartuSolanum lycopersicum30.8790.1298.34301forward
CNT30554477Triticum urartuOryza glaberrima39.6953.5398.45387reverse complement
CNT30147396Triticum urartuMedicago truncatula10032.7797.95975forward
CNT30438197Triticum urartuAegilops tauschii10093.1299.9975forward
CNT30258490Triticum urartuAvena sativa37.5450.6998.91366forward
CNT30660235Triticum urartuTriticum dicoccoides77.8580.6698.81759reverse complement
CNT30605146Triticum urartuGossypium raimondii77.9549.7798.03760reverse complement
CNT30216578Triticum urartuKalanchoe fedtschenkoi10029.2798.56975forward
CNT30655407Triticum urartuRosa chinensis100.129.297.64976forward
CNT30202530Triticum urartuHelianthus annuus54.5672.5897.18532forward
CNT30718256Triticum urartuMalus domestica golden26.5684.6488.8259forward
CNT30628241Triticum urartuDaucus carota10036.1198.67975reverse complement
CNT30369921Triticum urartuOryza glumipatula18.9780.4398.38185forward
CNT30429739Triticum urartuPapaver somniferum100.130.3494.36976forward
CNT30571858Triticum urartuVitis vinifera10028.1398.56975reverse complement
CNT3056076Triticum urartuAmborella trichopoda93.6439.6692.66913forward
CNT30320583Triticum urartuAsparagus officinalis27.3824.34100267forward
CNT30118993Triticum urartuCitrus clementina2877.5694.14273forward
CNT3038324Triticum urartuCucumis melo100.151.7597.85976reverse complement

Expression of CNT30682011

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

Sequence

>CNT30682011
GTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAG
GTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTG
AAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGT
GGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGGCGGGACACTGCGAGGTGGG
TAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCC
TGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCC
GGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAG
GGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGC
GAGGAGCCAGCCCTAGTACGAGAGGACTGGGCTGGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAG
AACTGCTGCGCCGAGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGGTTTTTGAACAGAACTTCGATAGGCGA