Detailed information on CNT30681988


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709610Triticum urartuGlycine max28.445.5890.3262forward
CNT304540Triticum urartuZea mays27.986.2488.5261forward

Expression of CNT30681988

Peptides detected in this lncRNA

>peptide 1 (71 aa)
ALWVAVAATRRVAPAASTSGYMLQPPQPLPHLQALPQPQLPPQQDIFEVAWDWMEALIGVAWDWMEALIGVG

>peptide 2 (71 aa)
RLVGGGGGDEEGGAGGLDLGVHVAAAAAVAALAGAAAAAASSAARHLRSCLGLDGGLDWCCLGLDGGLDWCW

>peptide 3 (56 aa)
PCGWRWRRRGGWRRRPRPRGTCCSRRSRCRTCRRCRSRSFLRSKTSSKLLGIGWRP*

Sequence

>CNT30681988
CGCCTTGTGGGTGGCGGTGGCGGCGACGAGGAGGGTGGCGCCGGCGGCCTCGACCTCGGGGTACATGTTGCAGCCGCCGCAGCCGTTGCCGCACTTGCAG
GCGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAAGTTGCTTGGGATTGGATGGAGGCCTTGATTGGTGTTGCTTGGGATTGGATGGAGG
CCTTGATTGGTGTTGGCT