Detailed information on CNT30681951


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3073023Triticum urartuQuercus suber9.3431.0984.3483reverse complement
CNT30190568Triticum urartuSecale cereale28.919.0293.77257reverse complement
CNT30389287Triticum urartuTriticum turgidum47.9279.7896.01426forward
CNT30148757Triticum urartuBrachypodium distachyon16.7624.2784.56149forward

Expression of CNT30681951

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MRKEKGRTPCGWRWRRRGGWRRRPRPQGTCCSRRSRCRTCRRCRSRSFLRSKTSSRLLGIGWRP*

>peptide 2 (42 aa)
RLNHGRFYLGVGLHAWECTCSAHAGRCLHTYKDPRSGSVTWY*

>peptide 3 (47 aa)
MTDDLAAAAGAATAGAALALGAAAAAVLRCHLHPAGAPAPIHPSLVP*

>peptide 4 (51 aa)
MHGSAPALLMLAGAYIHTKTLDQVALHGTRWMDGSIIDMMHARGACMIDDQ*

>peptide 5 (71 aa)
MMYEEREGTYALWVAVAATRRVAPAASTSGYMLQPPQPLPHLQALPQPQLPPQQDIFEVAWDWMEALIGVG*

Sequence

>CNT30681951
ATAGGTTAAACCACGGGAGATTTTATTTAGGGGTCGGTTTACATGCATGGGAGTGCACCTGCTCTGCTCATGCTGGCAGGTGCTTACATACATACAAAGA
CCCTCGATCAGGTAGCGTTACATGGTACTAGATGGATGGATGGATCGATCATAGATATGATGCATGCGCGCGGTGCATGCATGATCGATGATCAATGATC
TAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGGGGTTAAACCACGGGAGATTTTATTTAGGGGTTTACATGCATGGCATGGCA
CCTGCTCTGCTCATGCAGGCAGGTGCGTACATACATACAAAGACCGTGATCAGGTAGCGTTACATGGTGGTAGATGGATATATAGATAGATCATAGATAT
GAGGCACGCGGTGCATGCATGACCGATGATCTAGCAGCTGCAGCAGGAGCAGCCACAGCTGGTGCCGCACTTGCACTGGGTGCAGCCGCAGCCGCCGTTC
TCCGCTGCCATCTCCATCCTGCCGGAGCTCCTGCACCCATCCATCCATCCTTAGTCCCATAGCAAGATCAACATATATAGTCATATTACAGCGAGGCGCA
TGATGTATGAGGAAAGAGAAGGGACGTACGCCTTGTGGGTGGCGGTGGCGGCGACGAGGAGGGTGGCGCCGGCGGCCTCGACCTCAGGGTACATGTTGCA
GCCGCCGCAGCCGTTGCCGCACTTGCAGGCGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAGGTTGCTTGGGATTGGATGGAGGCCTTG
ATTGGTGTTGGCTAGGAGCTTCCTGTGTGCTTCTTGCTTGCTGGCTTGAGGAACAATGGCAGGCAGCGAGGGCTATTTATAGGCGAGTG