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Detailed information on CNT30681758


BLAST search results

BLAST vs Swiss-Prot:
sp|A6XMY9|METK1_TRIMO, E-value = 1e-145

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515028Triticum urartuJuglans regia26.6921.4485.16182forward
CNT30698521Triticum urartuQuercus lobata39.4447.9583.27269forward
CNT30729630Triticum urartuCorchorus capsularis50.444283.14344forward
CNT30524850Triticum urartuPhaseolus vulgaris31.8230.0683.87217forward
CNT30628634Triticum urartuVigna unguiculata35.4833.6184.71242forward
CNT30495282Triticum urartuOlea europaea30.511.8182.21208forward
CNT30712616Triticum urartuGlycine max22.7319.0787.74155forward
CNT3047442Triticum urartuPrunus dulcis31.0934.9885.38212forward
CNT30638840Triticum urartuCapsicum annuum21.8517.4589.93149forward
CNT3090332Triticum urartuSolanum tuberosum37.5439.3884.38256forward
CNT30181754Triticum urartuSecale cereale48.5352.6297.89331forward
CNT30294498Triticum urartuTriticum aestivum10085.3699.41682forward
CNT30389985Triticum urartuTriticum turgidum52.0534.9199.15355forward
CNT30561874Triticum urartuActinidia chinensis51.4739.883.19351forward
CNT30508429Triticum urartuSolanum lycopersicum18.7751.8285.94128forward
CNT30437887Triticum urartuAegilops tauschii47.5146.2999.69324forward
CNT30662024Triticum urartuTriticum dicoccoides37.9850.98100259forward
CNT3082721Triticum urartuBrassica juncea25.5160.2184.48174forward
CNT30650534Triticum urartuRosa chinensis48.3935.4185.15330forward
CNT30620815Triticum urartuCajanus cajan24.9323.2684.12170forward
CNT30571189Triticum urartuVitis vinifera44.5749.3584.21304forward
CNT3025891Triticum urartuPopulus trichocarpa47.3641.4683.9323forward
CNT30331991Triticum urartuDioscorea rotundata29.9143.1382.35204forward
CNT30725315Triticum urartuLupinus angustifolius50.8834.4984.44347forward

Expression of CNT30681758

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MIPWSPAPISSGRLVKCPCTPWAMSGDCCSMLTSTLHRSASRPTSSEMKPMLRQVSRTI

>peptide 2 (74 aa)
MAEGHELRGLIGGIAKHDTLVTSTNILRALGEMSVHTLGNVRRLLLYVDKHLAPISIKANIIRDEANVAAGVTHN

>peptide 3 (31 aa)
CQYHKSQQRQIRAQAHQWRRRSEQCSGVQDR*

>peptide 4 (78 aa)
MTKRPDGFKWNMVFSSRYFSGITGLMTCSLRYSTVTWVLPSGLSQAQVPFLRTSVRRAPSLVASTWLRGMSSGVSSVA*

Sequence

>CNT30681758
TTGCCAGTACCATAAGAGTCAACAAAGACAGATAAGGGCTCAGGCACACCAATGGCGTAGGAGATCTGAACAATGCAGCGGCGTGCAAGACCGCTAGCAA
TGATGCTCTTGGCAGCCTGCCTGGCAATGTAGGCGCCACTGCGGTCAACCTTAGTTGGGTCCTTGCCAGAGAAAGCACCACCTCCGTGTGCTCCCCAGCC
ACCATAGGTGTCGATGATGATCTTGCGACCAGTAAGACCAGCATCACCATGAGGGCCACCAATGACAAAGCGGCCTGATGGATTCAAGTGGAATATGGTC
TTCTCGTCCAGGTACTTCTCAGGGATAACCGGCTTGATGACATGCTCCTTGAGGTATTCAACCGTGACCTGGGTTTTGCCATCAGGCCTTAGCCAGGCAC
AAGTGCCATTCTTGCGGACTTCAGTGAGGCGGGCACCCAGCTTGGTGGCAAGCACATGGCTGAGGGGCATGAGCTCAGGGGTCTCATCGGTGGCATAGCC
AAACATGATACCCTGGTCACCAGCACCAATATCCTCAGGGCGCTTGGTGAAATGTCCGTGCACACCCTGGGCAATGTCAGGAGACTGCTGCTCTATGTTG
ACAAGCACCTTGCACCGATCAGCATCAAGGCCAACATCATCAGAGATGAAGCCAATGTTGCGGCAGGTGTCACGCACAATCT