Detailed information on CNT30681726


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3096581Triticum urartuSolanum tuberosum30.244.0185.3375forward
CNT30468850Triticum urartuSaccharum spontaneum72.5884.1188.33180forward
CNT30593102Triticum urartuEragrostis curvula58.8767.2887.67146forward

Expression of CNT30681726

Peptides detected in this lncRNA

>peptide 1 (61 aa)
PKSAWPTRESRWDSCGPRKTRWVILERGWPHSLMAFCAAALPSLGTSTTTMSWRASREGAM*

>peptide 2 (75 aa)
AEERLADEGVEVGLVRAAEDEVGDLGARLAPLLDGLLRGRLAELGDLDDDDVLARVQGGRHVGAHVGVLLKDLLR*

Sequence

>CNT30681726
CGCCGAAGAGCGCCTGGCCGACGAGGGAGTCGAGGTGGGACTCGTGCGGGCCGCGGAAGACGAGGTGGGTGATCTTGGAGCGCGGCTGGCCCCACTCCTT
GATGGCCTTCTGCGCGGCCGCCTTGCCGAGCTTGGGGACCTCGACGACGACGATGTCCTGGCGCGCGTCCAGGGAGGGCGCCATGTAGGCGCACATGTTG
GGGTTCTCCTGAAGGATCTCCTCCGTTAGGTGCATATATCTCTTCCTG