Detailed information on CNT30681720


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691356Triticum urartuOryza sativa91.3998.1298.781147forward
CNT30730412Triticum urartuCorchorus capsularis87.09100.1895.151093forward
CNT3011535Triticum urartuZea mays98.9677.2997.341242forward
CNT30557266Triticum urartuPanicum hallii99.277.1998.311245forward

Expression of CNT30681720

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

>peptide 2 (41 aa)
MRPVLLFIVTTSPCQDWVICAPAAFLGCGSRFSGSLSGIEP*

>peptide 3 (56 aa)
MPAEGSSRSVLAVRRTGRPGPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

>peptide 4 (50 aa)
MMLSHANVSRAMACFEHSNFFKVTMPETRPGQLRLGARCRPKGRVGRCSP*

>peptide 5 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

Sequence

>CNT30681720
CGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCA
TCACGATGAAATTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG
GCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGCCTAAACGGCGATAGTCCCTCTAAGAAGCTAGCTGCGGAGGGATGGCTCCGCATAGCTAGTTAG
CAGGCTCCACGCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGG
TGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTT
CGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCC
CCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGC
TTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGATGCCGGAAACACGACCCGGCCAGTTAAGGCTAGGAGCGCGATGCCGGCCGAAGGGTCGAGTAGGT
CGGTGCTCGCCGTGAGGCGGACCGGCCGACCCGGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTA
CCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAATGCGCCCGGTATTGT
TATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAAT
CGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACG
AAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGGATCAGTTATAGTTTGTT