Detailed information on CNT30681623


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SWG3|FAR1_ARATH, E-value = 2e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186386Triticum urartuSecale cereale10.6340.8582.8250reverse complement
CNT30304994Triticum urartuTriticum aestivum57.2942.6894.651347forward
CNT30398379Triticum urartuTriticum turgidum35.3934.5794.23832forward
CNT30655853Triticum urartuTriticum dicoccoides20.1284.0193.23473forward
CNT30719766Triticum urartuTriticum spelta22.8443.9893.67537forward

Expression of CNT30681623

Peptides detected in this lncRNA

>peptide 1 (64 aa)
NKTFFFSYNLLKTIFLCLIRVYRCCHSLFHSHSFHCEGGFRPGEIHRSGPSPAARPELYSAVHL*

>peptide 2 (62 aa)
MFILIVQLQSRFNPLVAISLFFSLYSLYCDYILNVAFNWLLLCDYILNVAFNWLLLCLFMIW*

>peptide 3 (77 aa)
MTRYLCSYFLWNTIPFLLCLFLLFSSSPDLILLLLFPYSFLFIPCTVTTFSMLHSTGCFSVTTFSMLHSTGCFSACS*

>peptide 4 (67 aa)
MGSITASSARLRRAAPRPAVDLAGGKTGAVAASVARLRHTQGQPKVVADPLPVRWWHGGTAARAAGG*

>peptide 5 (33 aa)
MHDDTILQQIQTFCMSMKLLIHWDQISQYDYFG*

>peptide 6 (52 aa)
MGNLEFRNRASTTTLVHTISHYHVKFSFKYLKHSRCIYFRCLYKHRHIWHLW*

>peptide 7 (31 aa)
MRTRCKLNRQSLWYRRHSGRKYLQIVVRNIW*

>peptide 8 (32 aa)
MSNSPLNISNIAGVYTFDVCISIGTYGTFGDV*

>peptide 9 (29 aa)
MAPLVMFDSHRNHFPLQHTFYHLQPSHSA*

>peptide 10 (30 aa)
MALLNVSNNHSNVSDVSSYNNAAPKTTVCL*

Sequence

>CNT30681623
TTAATAAAACGTTTTTCTTTTCTTATAATTTATTGAAAACAATTTTTCTTTGCCTTATCCGTGTGTACCGCTGCTGCCACTCCCTCTTCCACAGCCACTC
ATTCCACTGTGAGGGAGGATTCCGACCAGGAGAAATCCATCGTTCAGGTCCGTCGCCGGCGGCAAGACCGGAGTTGTATAGCGCCGTCCATCTCTGACGC
GCTTCGCCGCCCAGAGCTGTCACGGCTAGCGCCACCCGTCTCCGGCGCGCTTCACCGCCATGAGCCGCGGGGTTCGAAGGCAGTAAGACAGAAATCGCCG
CCGCTCGCCTCCGGCACGCTGCGCACGGCCTGGGGCAGTTGTATTGGCTGGAGGCAAGATGGGATCCATCACGGCTAGCTCCGCTCGCCTAAGGCGCGCT
GCACCACGCCCAGCCGTGGACTTGGCCGGCGGCAAGACGGGGGCCGTCGCGGCTAGTGTCGCTCGCCTCCGGCACACCCAAGGCCAGCCCAAGGTTGTGG
CTGACCCGCTCCCTGTGAGGTGGTGGCACGGTGGAACTGCAGCGCGTGCAGCCGGTGGCTGAGATTCCGTGGGAGTTCGCGTGGTCACAGTGGAAGATGC
GAACTCGATGCAAACTCAACAGGCAAAGCTTGTGGTACCGAAGGCATAGCGGGCGGAAATACTTGCAGATTGTAGTTCGCAACATTTGGTAGTGGAGGCA
TAGCATGCTGCAATACTTGCAAATTGTAATTAGCAGCATTTGGTAGTGGAGGCATAGCATGTTGTACTACTTGCAAATTATAGTTCTCATTTGATATGTT
GAAGCTAGGATTTGGTCCAGATGATGCAGAAGCACAATCACCAATCTTATTCTTGCATGTTGTTCCTTGACCTATTTGCAGAAAAAATGTTAGATCTATT
TCAATAACATGACCAGATATTTATGTAGCTATTTCTTGTGGAATACCATACCTTTCTTATTATGTTTATTCTTATTGTTCAGCTCCAGTCCAGATTTAAT
CCTCTTGTTGCTATTTCCTTATTCTTTTCTCTTTATTCCCTGTACTGTGACTACATTCTCAATGTTGCATTCAACTGGTTGCTTCTCTGTGACTACATTC
TCAATGTTGCATTCAACTGGTTGCTTCTCTGCTTGTTCATGATTTGGTGATATATCTTTTGATTGATTTCCATGTAAAATTTGGTCCACCTTTTCCATTA
GTTCAATTGACATAGTCTGCAGTAGTGCATATGCCTCTTTGTTTGCTGCTGCTTTGCTCAAAATGTTATTGTAAGTGCGGCATAATGATCCATACTGCCT
AGCTAGCATAACTCTTATATCTTCATCATCACTGCACTTTTGAATTGCCTGTGAGGGCCCTGATTTTGCTCGCCTTGTCCATCTTTTCAAGATATATTCC
GGTGCCAACTCCTTTATATTGTTGTGGTCCAACACCTTTAATGCATGACGACACAATACTCCAACAAATTCAAACTTTTTGCATGAGCATGAAACTTTTG
ATCCATTGGGATCAAATTTCACAGTATGACTATTTTGGCTAGCTGAATGGGTAACCTTGAATTCAGAAATAGAGCCAGTACGACCACTCTCGTACACACA
ATATCCCATTACCATGTCAAATTCTCCTTTAAATATCTCAAACATAGCAGGTGTATATACTTTCGATGTTTGTATAAGCATCGGCACATATGGCACCTTT
GGTGATGTTTGACTCGCATAGAAATCACTTTCCACTTCAGCATACCTTCTATCATCTACAGCCCTCTCATAGTGCTTGAAGAAATCTAATAAATCCAGGC
GAACATGCAGGTATCGTTTCAATAGTGCATTGATACTCTCGCTTCTTTGTGTGGATATCATATCTGCACAAAAGGTTTTTCAACCATAAACCAAAGCCCA
CTTCTCCTTGTTCTGAAATAATCTATGTAGCCAGTCATTATCTTCCAAATTATATTTCACTAGCATATCATTCCAACCTGCTATGAATTCATCAACTTCT
TCAAAATCATAAACACACTTGCCAAAATCTTTCTTAAATGTCTTGGAACCTTGGAAAAAATGACTCAAATGTTTTGCAGCGTTCTGATACATGTGCCACA
CACATAGACGATGTGTTGAGTTAGTAAAAATCTTGCCAATGGCACTAATAATGGCAGCACACTGATCGGTCAATATTGTCTTTGGTTCTTTTCCTGACAT
GGCCCTTTTGAATGTTTCAAACAACCACTCAAACGTCTCAGATGTTTCATCATACAATAATGCAGCTCCAAAAACCACTGTTTGTTTATGATGGTTGACA
CCAACAAAAGGGGCAAATGGTCTGCCATAACTATTTGTCTTAAAGGTTGTG