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Detailed information on CNT30681552

BLAST search results

BLAST vs Swiss-Prot:
sp|P27665|PSBO_WHEAT, E-value = 4e-140

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30378380	Triticum urartu	Arabidopsis thaliana	11.61	20.89	86.41	103	forward
CNT3091587	Triticum urartu	Solanum tuberosum	11.5	27.64	84.31	102	forward
CNT30221070	Triticum urartu	Hordeum vulgare	23.56	90.09	96.65	209	forward
CNT30567883	Triticum urartu	Actinidia chinensis	22.55	9.28	79	200	forward
CNT30597992	Triticum urartu	Fraxinus excelsior	14.32	36.39	83.46	127	forward
CNT30571093	Triticum urartu	Vitis vinifera	12.06	25.6	83.18	107	forward

Expression of CNT30681552

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MPSALTVKEVGSRQNFFISYLPALKGKESTPPSMVGHWFAVPVPFTSM*

>peptide 2 (60 aa)
MSDCREQVILAPASTPNARATCDDGRAEEARPPILAGISVAAAWRDAAMLVGGLVRGRIDP

>peptide 3 (69 aa)
LTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVTLSVMLPVDEDAFFTFSLANSSSSPLPPAGSATALS*

Sequence

>CNT30681552
CTTGACATCCTTGGGCGCCTTGGCGCCGAGGTCGGTGTCTGACGGCTGCACGCTCTCGAAGACACCGATCACCTCGCCGGTCTCCGGCTTGCTCTTGGTC
ACGCTGAGCGTGATGTTGCCCGTGGACGAGGACGCGTTCTTCACGTTCTCCTTAGCCAACTCCTCCTCGTCTCCTCTGCCTCCGGCGGGTAGCGCCACGG
CGTTGTCGTAGCCAGTAGAGCCACCACGGCCCTTTGGGTCGAGGAAAGACGAACCCCTGTAGCTGGGCACGAGGAAGGGCCCGCTGAAGCTCTCGGGCTT
GCCGGTAGCGACGAGCTGCTTGACGGTGAAGAGGAAGGGCACTCGCTCGCCTCCGGGGAGCTGCACGGTGACGGCCGCGTAGTCGATGCCGTCCTTCTCC
TCGAACTTGAGGGTGCCGTCGGCGCCAACCTCGAGCGGGCCTTCCATCTCGTCAAGGGTGTAGGTGAGACGGGCCGGCGGCTCGTTCTTCTGGATGCCCT
CGGCCTTGACGGTGAAGGAGGTGGGCTCCAGGCAGAACTTCTTCATCTCGTACTTGCCGGCCTTGAAGGGGAAGGAGTCGACGCCGCCGTCGATGGTCGG
GCACTGGTTCGCGGTGCCGGTACCCTTCACCTCCATGTAGGTCTTGCTCTGGATCTCCCGGCCATCTTGGCGGCGTCGGCGCACTTGCTTGCGACCTCCC
TGATGTCGGACTGCAGGGAGCAGGTGATCCTGGCGCCAGCGTCAACGCCGAACGCCCGGGCGACGTGCGACGACGGCCGCGCGGAGGAGGCCCGGCCGCC
GATCTTGGCCGGCATCAGCGTGGCCGCGGCTTGGAGAGACGCTGCCATGTTGGTCGGTGGCTTGGTACGCGGGAGGATCGATCCCAC