Detailed information on CNT30681536


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521306Triticum urartuSetaria italica53.4215.5188.8125forward
CNT30657835Triticum urartuTriticum dicoccoides71.7960.2297.62168forward
CNT30135654Triticum urartuLolium perenne32.4835.8590.7976forward
CNT30351340Triticum urartuEragrostis tef28.212389.3966reverse complement

Expression of CNT30681536

Peptides detected in this lncRNA

>peptide 1 (63 aa)
KIIFSFHTCMHLILPPLLTLLRPALPERRLMGRPAVDLSPWKGATVVAEEAITAGAMAEYVNC*

>peptide 2 (71 aa)
KNNIQLSYLHASDPSAIADVAEAGAAGAAADGKAGGRLEPLEGRDGGGGRSHHGGGHGGVRELLGGEAIAS*

Sequence

>CNT30681536
CAAAAATAATATTCAGCTTTCATACCTGCATGCATCTGATCCTTCCGCCATTGCTGACGTTGCTGAGGCCGGCGCTGCCGGAGCGGCGGCTGATGGGAAG
GCCGGCGGTCGACTTGAGCCCCTGGAAGGGCGCGACGGTGGTGGCGGAAGAAGCCATCACGGCGGGGGCCATGGCGGAGTACGTGAATTGCTAGGTGGGG
AGGCGATAGCTAGCTAGGCCACACTTGACTTGAG