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Detailed information on CNT30681493


BLAST search results

BLAST vs Swiss-Prot:
sp|P80264|NDUS2_SOLTU, E-value = 7e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675027Triticum urartuSetaria viridis43.9378.9597.55735forward
CNT30548493Triticum urartuIpomoea triloba28.0958.2493.4470reverse complement
CNT30619472Triticum urartuSesamum indicum16.2642.591.91272reverse complement
CNT30405732Triticum urartuBeta vulgaris48.4265.4389.26810forward
CNT30201968Triticum urartuPisum sativum35.874.9793.49599forward
CNT30164425Triticum urartuPistacia vera40.7136.6991.63681reverse complement
CNT30194250Triticum urartuSecale cereale10062.5499.581673forward
CNT30297416Triticum urartuTriticum aestivum66.1780.1699.371107forward
CNT30221243Triticum urartuHordeum vulgare35.1527.2997.79588forward
CNT30592657Triticum urartuMusa acuminata40.5319.2587.32678forward
CNT30544645Triticum urartuBrassica napus28.5742.7590.79478forward
CNT30239187Triticum urartuBrassica oleracea32.5844.8290.64545forward
CNT30510913Triticum urartuSolanum lycopersicum16.236.4291.51271reverse complement
CNT30554880Triticum urartuOryza glaberrima15.4220.297.67258forward
CNT3079706Triticum urartuBrassica juncea32.1647.6191.64538forward
CNT30104344Triticum urartuOryza rufipogon24.2125.0899.01405forward
CNT30726873Triticum urartuLupinus angustifolius13.6373.0890.79228forward

Expression of CNT30681493

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MLRMLRHGIDRFSSPSFPVHSLCISDTQGRTRWEESCPSLCPVDHSAGILHSRLRLTAARECSCRYVSLSGSLAPPLISFYDML*

>peptide 2 (66 aa)
MQSVSALDYSIHDRRIMAPRKHSIQQQHLLQPREDKTDVSYIRAFTAQRRSRTLPMIINPKERSTK*

>peptide 3 (69 aa)
MRTSFPFALPTLRSHGYQSGGRAGSRYHEPSVPHIYQEASVVHRFHRMLLSLGKDRVSVQLCFGCFAME*

>peptide 4 (33 aa)
LRIGGGLSSGSRLLAEMNGSERGLGSISGPGRR*

>peptide 5 (44 aa)
MIEGSWRPGSIPSSSSISFNHARTKLMLATFERSPHRGDLEHYL*

>peptide 6 (30 aa)
MSSRMLRSGIRSEILDLPVPSRHGKEIRKK*

Sequence

>CNT30681493
CTTCGAATAGGAGGGGGGCTTAGCTCTGGATCCCGCCTGCTTGCAGAAATGAATGGATCAGAAAGGGGGCTGGGTTCTATTTCCGGGCCGGGCAGGAGGT
GAAGGCCAGAAGAAGAAGAGAAGTGCGCCTTCCCGGTAAGGAAGAGGATAAAAAGGTGCTGTCATCTATCTCGACCTGTTTCCCGAGGCGTTGGAAATGA
AGACCGGCTCAGAGAATCACTGGCGTGCTTTCTCTCCCCCATCGTTTCGCCAACAAAGAAGTCATCCTTGACTTGACTATTGACCATTCCATCCCTACCG
AGCTGCCTCTTCGAAGTATTTACCTCTGCCTTTCTTTTTTGAGAACATACCCTTCAAATCAAAAAGAAAAAAAGAAAGAAAAGTTCCTCGTCTGTGATTT
AATCGGCCCTAAGGGAGTTTACTTGACCCATTCTCCAGTCTCCCGCACTGCTCAAGTGTGCGACTCCGTATGAGGACCTCCTTCCCTTTTGCTCTGCCCA
CTCTCCGTTCACACGGTTATCAAAGCGGAGGAAGGGCGGGCAGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCAAGAAGCAAGTGTAGTTCACCG
GTTCCACCGAATGCTCCTATCTCTCGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATGGAATAGATCGATTCAGTTCCCCTTCTT
TTCCGGTGCACTCGCTTTGTATCTCCGACACACAAGGAAGGACGCGGTGGGAAGAAAGCTGCCCTAGCCTCTGTCCGGTCGATCATTCCGCTGGCATCTT
GCATTCACGCCTCCGTTTGACTGCCGCTCGGGAATGTAGTTGTAGATACGTGAGTCTTAGTGGGTCGTTGGCTCCACCTCTTATCTCCTTCTACGACATG
CTGTAGTCGTCGCCATATTCAATATGTCACTTAGTCATATCTGCCTCGCAGCGGGTCAGCACCTCCGAAAGAAAGGGAGGGAGGACTTCATTCAGTGACT
CCGCGATCGCCCTCTAAACGATCAAAATAAGGTAAAGCTTGAAGATAAGTTTTGTACTCGATTAATTTCTCAGTCCCTCTAGTCGGTGATCCAATATGTG
GTTCCGCACGTTCCACCACTTCTCCGTTCATTTCCAATACTGATCGTGAAACACCATGAGCAGCAGGATGTTGAGGTCCGGAATTCGAAGTGAAATTCTT
GATTTGCCCGTTCCTAGTCGTCATGGGAAAGAAATAAGAAAGAAATAAGAAAGAGATTATTCCCCTAGAGCTTGTCCAGTACCACCAGTACTCAAAATGC
ATCTCCGCGCGTCTACCTGGCGCTTTTATTAGCCGCCTTGCATGCAAGCGAAGCGCTATTGGCGGCAATTAATAGCTCACTGAGCGATGATTGATGCAGT
CAGTCAGTGCCCTCGATTATTCTATTCATGATAGAAGGATCATGGCGCCCCGGAAGCATTCCATCCAGCAGCAGCATCTCCTTCAACCACGCGAGGACAA
AACTGATGTTAGCTACATTCGAGCGTTCACCGCACAGAGGCGATCTCGAACACTACCTATGATAATAAATCCAAAGGAAAGGTCGACAAAATGATTCAAT
CTGACTTTATCGGTATTCTGGATTGAGTAAAAAAGGGATATATGAAGTTCAAGGCCTTGCCAAAACCGTCATG