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Detailed information on CNT30681118


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40459|PSBO_TOBAC, E-value = 2e-125

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592113Triticum urartuMusa acuminata35.859.0785.58430forward
CNT30244672Triticum urartuAvena sativa37.9761.3793.42456forward

Expression of CNT30681118

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLPVDEDAFFTFSLANSSSSPLPPAGSATALS*

>peptide 2 (63 aa)
MSDCREQVILAPASTPNARATCDDGRAEEARPPILAGISVAAAWRDAAMLVGGLVRGRIDPTGG

Sequence

>CNT30681118
TGTCAACAAAGAATTTTGTGAACATTCATGGGGGATCAATATCATGAGTTGGCGAGGAAGAAACAATAATAACAGAAGCTAAAATATAAACCGACACCCT
GGGTTTAGATTACTAGATACACACACAAACACATTTGTTGCCTCGATTGTTTCCTCTCCACCGATCAACCCACGTACGCATGCACACAAGATGAGTATCT
TCACTTCTGCTCTGCTCTAGTTAGACTCGAGCTGCGCGTACCACACACCCTGGATCTTGACATCCTTGGGCGCCTTGGCGCCGAGGTCGGTGTCTGACGG
CTGCACGCTCTCGAAGACACCGATCACCTCGCCGGTCTCCGGCTTGCTCTTGGTCACGCTGAGCGTGATGTTGCCCGTGGACGAGGACGCGTTCTTCACG
TTCTCCTTAGCCAACTCCTCCTCGTCTCCTCTGCCTCCGGCGGGTAGCGCCACGGCGTTGTCGTAGCCAGTAGAGCCACCACGGCCCTTTGGGTCGAGGA
AAGACGAACCCCTGTAGCTGGGCACGAGGAAGGGCCCGCTGAAGCTCTCGGGCTTGCCGGTAGCGACGAGCTGCTTGACGGTGAAGAGGAAGGGCACTCG
CTCGCCTCCGGGGAGCTGCACGGTGACGGCCGCGTAGTCGATGCCGTCCTTCTCCTCGAACTTGAGGGTGCCGTCGGCGCCAACCTCGAGCGGGCCTTCC
ATCTCGTCAAGGGTGTAGGAGTCGACGCCGCCGTCGATGGTCGGGCACTGGTTCGCGGTGCCGGTACCCTTCACCTCCATGTAGGTCTTGCTCTGGATCT
CGTCGAAGGTCAGCCTCTTGGGCGCCCCCTCCGCGCTCGCGCCCTGCACCCACGCCTGTCACTCTAGCTAGCTGGACTGGAGTGGAGTAAACGGCCATGG
ACGGCAATAGAATGGATTAGTCAGCTTACGGAGACGAGGAGGGCAGAGGTGGCGAGGGCGAAGCCGGCCATCTTGGCGGCGTCGGCGCACTTGCTTGCGA
CCTCCCTGATGTCGGACTGCAGGGAGCAGGTGATCCTGGCGCCAGCGTCAACGCCGAACGCCCGGGCGACGTGCGACGACGGCCGCGCGGAGGAGGCCCG
GCCGCCGATCTTGGCCGGCATCAGCGTGGCCGCGGCTTGGAGAGACGCTGCCATGTTGGTCGGTGGCTTGGTACGCGGGAGGATCGATCCCACTGGTGGT
T