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Detailed information on CNT30681037


BLAST search results

BLAST vs Swiss-Prot:
sp|Q02500|NU6M_WHEAT, E-value = 5e-138

BLAST vs NONCODE:
NONMEST001729, E-value = 8e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30284742Triticum urartuTriticum aestivum47.6887.2795.49576forward
CNT30390425Triticum urartuTriticum turgidum40.8952.2894.94494forward

Expression of CNT30681037

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLQAILSFPPPSYDGLHNLPPEAFLCFPPL*

>peptide 2 (43 aa)
MFASRGKRKARKRISSVLRTERSLSGFCTKPGKNPKCCLKKSI*

>peptide 3 (46 aa)
MAMAKRRNSPVHYIPPRIQGISSEYILSFHLCSPMHSKYYSPNHSY*

Sequence

>CNT30681037
GGAGAGTGGTAACGTGAGCCACCTTTCCTTTATACAGCAGTAATAGCACATGCAAGTTCCTAGGGTCTATATAGCTAGTCAAGGATCATAAAACAATTAG
CAAATCATCATGTGGAATGATGTAAACTAGCCTAAAAAAGTGAAAGAAGCCCTCATACCCACTCCTCTTTCCCCACCAAACCAACAAGTAGTAGGTTGGT
GGGCCTCGGTATCTCTATTTGCTAAGATGGATACCTACACCACTCAATAGTTCTAATTCATTGTTTTTTATCCCATAGGAAAGAAAATGCTTCAAGCAAT
TTTGTCCTTTCCTCCTCCATCATACGACGGTCTTCACAACCTTCCACCGGAGGCTTTTCTCTGTTTTCCTCCTCTTTAGCCATTGCGTCTTGAATCATAT
CTTTGATCTTCTTTAGGGGCAATTTAAACATGTTCGCATCCCGCGGGAAGCGGAAAGCCAGAAAGAGAATTTCCTCCGTTTTAAGAACCGAAAGGAGTTT
ATCCGGATTTTGTACCAAACCCGGGAAAAACCCTAAATGTTGTCTTAAAAAATCTATATAAGCAGGGTTATAGGAATCCTGAGATTCCCCTCCCTCCGCT
TTGGAGGAGAAGCTTCTTCTATGGCTATGGCCAAAAGGAGAAATAGTCCTGTTCATTATATTCCTCCTAGAATCCAAGGCATTTCGTCGGAATACATCCT
GTCTTTTCACCTTTGTAGTCCTATGCATAGTAAGTACTATAGCCCCAATCATAGCTACTAATAAAATCAGACTAGAAACCAAAAACCAGACGGAATAGTA
GGTATAAAGCAAATTGCCCAATGTTTCCAAATTAGTCCAACTTCGTACCTTTCCGGCATAAACCGTATATCTCAGAGAGGTCGTATTTTTGTGGGTTGGT
AGTAATGGAATGGTTTCATTATCTAAAATGAAGAACATTTCCCACCAAAAGATCAGTCCAATAATACCACTCACTGGTAAATAGCGCAATACTTCTTCGT
GAATCTCCACTATTTGAATATTGAACATCATAACCACGAATAGGAATGAAACGGCAATAGCTCCTATATGAACTACTGGGGAGATCATAGCGGAGAAGTC
GAGACCTAACAAAATAAGTAAACCAGAAGTGTCGCAAAAGACTAGGATGGGAAACAAAACGAAATGTACCGGATTTTTAGCACGTACAACCATCAAACCA
GAGACCAA