Detailed information on CNT30680887


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690617Triticum urartuOryza sativa32.177.6684.7892forward
CNT30252253Triticum urartuAvena sativa24.838.785.9271forward
CNT30455685Triticum urartuSaccharum spontaneum32.176.3284.7892forward
CNT30363948Triticum urartuSorghum bicolor21.3319.9386.8961forward
CNT3099938Triticum urartuOryza rufipogon32.178.6884.7892forward
CNT30579873Triticum urartuEchinochloa crusgalli33.927.1183.5197forward

Expression of CNT30680887

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MTSPTSRSPPKMRSTRRRMWRQPPVASSAVGGT

>peptide 2 (94 aa)
VDGYLQMGLRQDDGAETVREVEQAAHLGAVHLADLVGRELRHAVGAVVGAVADAGEDLGEGHDDLADVAVAAEDALDAEEDVEAAARGLLGGGRH

Sequence

>CNT30680887
GTCGACGGGTATCTCCAGATGGGGCTCCGGCAGGACGACGGGGCCGAGACGGTACGTGAGGTAGAGCAGGCCGCGCACCTCGGTGCGGTGCACCTTGCGG
ATCTGGTAGGACGCGAACTGCGGCATGCTGTGGGCGCCGTAGTCGGCGCCGTGGCCGACGCCGGAGAGGATCTCGGAGAGGGGCACGATGACCTCGCCGA
CGTCGCGGTCGCCGCCGAAGATGCGCTCGACGCGGAGGAGGATGTGGAGGCAGCCGCCCGTGGCCTCCTCGGCGGTGGGCGGCACG