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Detailed information on CNT30680853


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 9e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695194Triticum urartuOryza sativa53.7632.4392.67300forward
CNT30221568Triticum urartuHordeum vulgare100.7253.6891.46562forward
CNT30562752Triticum urartuActinidia chinensis23.6610.4387.88132forward
CNT30554457Triticum urartuOryza glaberrima44.0920.4891.46246forward
CNT30659938Triticum urartuTriticum dicoccoides87.9991.695.11491forward
CNT30596639Triticum urartuOryza meridionalis52.8717.8292.2295forward
CNT30370623Triticum urartuOryza glumipatula44.0917.891.46246forward
CNT30581346Triticum urartuEchinochloa crusgalli54.8450.4193.79306forward

Expression of CNT30680853

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MYPITSTSIQISVVSVNGSGCPRYDDPSTSS

Sequence

>CNT30680853
GATTGATGTACAAGTGGATGCATTAAGTCACCATTGGTTCATATTTTACAAATCACCAAGTCCCAGCAGCTCTCCTATGTGATCAGACCTGCATTACTCA
ACAAAGGATCTTTGCGATACCCTCTCATCCATCACTCGTCATATACAAAACGAAAAGCACGTTCGTTACACGGACGCGCGTTCGTCCATTTTGCAGCCGA
GCTGACAGAAATTGCTCGACCACCGACCACTTAAGAGGAGCCCAAGGTGGGTGGCCCAGTTGTTGAGCGGCCCCTTGCCGGTGGCGGCGGCCTGCACGGC
GAAGCCGAGGAAGGCGACCATGGCGAGGCGGGCGTGCTTGATCTCCGCCAGCTGCAGAGTCTCCTTCTTCTCCGGGTCCGCCGCGAGACCCAGCGGGTCG
AAGTAGGAGCCACCGGGGTAGAGCCTCCTCTCCGGGTCCAGCTCCGCGTTGCGCTGGAACTCGATGTACCCGATCACCAGCACCTCGATCCAGATCAGCG
TGGTGAGCGTGAACGGCAGCGGCTGCCCCAGGTACGACGACCCGTCCACCAGCTCCAC