« Back to Triticum urartu search


Detailed information on CNT30680824


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30444207Triticum urartuAegilops tauschii52.4545.5797.67771forward
CNT30309523Triticum urartuCamelina sativa70.5457.4595.661037forward
CNT30369005Triticum urartuSorghum bicolor52.4549.1497.41771forward

Expression of CNT30680824

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMRRRHEGRAIRRVIMNHRISEQSPRQPFI*

>peptide 2 (41 aa)
MRPVLLFIVTTSPCQDWVICAPAAFLGCGSRFSGSLSGIEP*

>peptide 3 (55 aa)
MRPSQKSGFVARISSRITTVIRVARTIKQTITDLMSHSQFHSSNWFILAHAWLNL*

>peptide 4 (87 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGSSRSVLAVRRTGRPGPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

Sequence

>CNT30680824
CGCCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCTCGTTGAAGACCAACAATTGCAATGATCTATCC
CCATCACGATGAAATTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA
AGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGCCTAAACGGCGATAGTCCCTCTAAGAAGCTAGCTGCGGAGGGATGGCTCCGCATAGCTAGT
TAGCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGACC
TGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACGCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTC
CCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTA
GGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCA
AGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGGTCGAGTAGGTCGGTGCTCGCCGTGAG
GCGGACCGGCCGACCCGGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCAC
CAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAATGCGCCCGGTATTGTTATTTATTGTCACTAC
CTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCC
GTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAAGGCCGTGCGATCCG
TCGAGTTATCATGAATCATCGGATCAGCGAGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCAGAAGTCGGGGTTTGTTGCACGTATT
AGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCAAATTGGTTCA
TACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCACG