« Back to Triticum urartu search


Detailed information on CNT30680607


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104567Triticum urartuOryza rufipogon8.5128.9210072forward

Expression of CNT30680607

Peptides detected in this lncRNA

>peptide 1 (85 aa)
DRIGLCAPGPSGVHILADLSVYTMLCGRNILIPSTAVTPEIQGSTRAPVLRRGGRTARGLAPGVGRVKSAGVMQIHRPLPFCRVV*

Sequence

>CNT30680607
GGATAGGATAGGATTGTGCGCGCCGGGCCCTTCGGGTGTCCATATTTTGGCCGACCTTAGCGTATATACTATGTTATGCGGCCGTAATATTTTGATACCT
TCCACCGCTGTTACGCCAGAAATCCAAGGTTCCACACGAGCTCCTGTTCTGCGGCGTGGTGGCAGGACCGCTAGGGGATTGGCTCCGGGTGTAGGTAGGG
TCAAATCCGCAGGGGTCATGCAAATACATAGGCCCCTTCCCTTCTGCCGAGTTGTTTAGAAGGCGCTTTCCGTTCTACGGTCCCTCGGAGCGAAGGGTTA
GGCAGGTAGTACGGGCCCTCTGACTTCCAGCTATGTGCTGTGTGCGACTCCCGCGAAGCGAATGAAGGGAAGCTCTTCGAGCTTTCTCCGCCAGCGGCTT
ATGTAGTGGTCGGCATTCCTACGTGCTCCGACTGATCCCCACTGGAGATTATATGAGGGGTCTTGGAAACTGTCGTGACGCTTTGGTGACGAAGGTCACC
GGGGTGACTATGGAAGGATTCCGTGGTAGTCTCTGACTCCCTCCAACTCAATCAATATCAAGAACATGTCGTGAGCATGGGGGTTTGGCCGACTACTAAA
CTATTGGCTAGGGCTTTTCTAGTTATAGCTTCTATAGTGAGTGGCCCTTCCGCTTTGATCTAGTTTTAGTTTGTATTGTACTAAATTGAACACATATCAA
AGAAAGGCGATCAATCAATAAGTAGTTGCCCTTCTCCGGCCTGGGAAAAGCAGCGAACTCGTTAAACAAGGGGCTTTTTTATTCATGGTCGCTACTGTTG
TATTGTATATTGTCGGGGGAAGCTACTGCTTCTACGATAGCTCCGC