Detailed information on CNT30680520


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONATHT001124, E-value = 1e-100

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378674Triticum urartuArabidopsis thaliana15.0720.7291.28436forward
CNT30269710Triticum urartuChenopodium quinoa6.8447.1494.95198forward
CNT30162048Triticum urartuPistacia vera8.2286.2393.28238reverse complement
CNT3098426Triticum urartuSolanum tuberosum8.0227.4297.84232reverse complement
CNT30226250Triticum urartuHordeum vulgare33.6273.7799.38973forward
CNT30341981Triticum urartuEragrostis tef5.623.5890.74162reverse complement
CNT30100822Triticum urartuOryza rufipogon8.8899.6198.05257forward
CNT30578173Triticum urartuOryza barthii50.7643.2798.091469forward
CNT30115142Triticum urartuEutrema salsugineum4.0428.7596.58117reverse complement

Expression of CNT30680520

Peptides detected in this lncRNA

>peptide 1 (95 aa)
MAERRWQAVIWIRCFTRRRFSSSRKNCMGVVLGGTSRMTVPGNSTVLRAAMVVDPAEPTQRFRPDCRKWVIRFCISMRRNTAPTIPSSKSSAYRA*

>peptide 2 (89 aa)
MFPFFHSQVKGESHASVCGSRSHALIPTGAHSRPAALPKPIIISVPRPHCWKGSASKPYVELPPHTAPLGMGVGPAQACAVKVVVHDLS*

>peptide 3 (52 aa)
RTRFPLLHRAFSSVAGFGGPKLTWLRQKASSPKPGSRGVPLAVGRSPLASLL*

>peptide 4 (56 aa)
MAKFLLKPSLPLNSAFGVNPAASMRKAAQRRLEGLLRKAARAAEGGKTKGVFWSPLR

>peptide 5 (59 aa)
MQLRGPLVGPDRWWYHTLLKGTVRETLASYGSVLESGPPFSFDQRVLEPMGVTNHSSID*

>peptide 6 (88 aa)
MPADQFTMSLSLTLVKEATWIGLGLLRLMRPRSRSLRSIFLIGASICMGNSLLKDPAQCPLPSPAAFRPKGVYNFFFRTLMPDRETAC*

>peptide 7 (36 aa)
MIEARTLSGQVPLIDHNDIVEMLHGPIYIETEKEEP*

>peptide 8 (43 aa)
MKEKGLRIRKTKEAWRADYKTTTTIQAMSDSEAFSLFFRKPHN*

Sequence

>CNT30680520
AACGTACACGCTTCCCTTTACTCCATAGGGCCTTTTCCTCAGTTGCAGGGTTTGGTGGCCCGAAATTGACTTGGCTTCGCCAAAAGGCCTCATCTCCAAA
GCCCGGCTCGCGAGGCGTCCCTCTCGCTGTAGGGCGGAGCCCCCTCGCCTCGCTCTTGTGACATGCTATGTTTCCCTTCTTCCATTCTCAAGTCAAGGGT
GAGTCCCATGCGTCAGTTTGTGGATCGCGGTCTCACGCACTAATCCCTACAGGTGCCCATAGTAGGCCGGCCGCCCTACCTAAACCAATCATCATATCGG
TCCCTAGGCCCCATTGCTGGAAAGGCTCGGCTTCAAAACCGTACGTGGAGCTTCCGCCTCATACGGCTCCTCTAGGGATGGGGGTAGGCCCAGCCCAGGC
TTGTGCGGTTAAGGTTGTTGTACACGACCTCAGTTGAGCATTCAGTTAGAGGCGGCGATCGCAGGTTCGCCGGAGGAGAGGGTGTTGCGAGCAAGATTGC
ACAAACAAAGCCCTCCTGCCCGCAGCCCTATTCTAGAAATTAGGCTGGCTACGTTACTTATAACCGCAGAACGAGCAATGAATCCCCAACGACAAACGAA
CAAGGGGCGGGGCATTTTCGGGGAGTAGCCCCCTTCAGAAGAAACTTCCTGGCACATACATTAAGGGAGCCATCGAAAGGTGACTGAAACACCTGAAACG
GGGACTACCCGAGCTAATGATAGAGGCAAGAACACTTTCCGGCCAAGTCCCATTAATTGATCATAACGATATCGTGGAAATGCTGCACGGACCCATATAT
ATAGAAACAGAAAAAGAAGAACCTTGATACTAAACCAGATCGAACAAGGGATCTTCTTGGAAATGGGAAGATCTAGGATAGGCAGCCAACCTCCTGGAAA
GAGCGATGTGCATAGACCGGGTGAGTAGGGATGCAGCTCCGTGGACCGCTCGTCGGGCCTGATAGGTGGTGGTATCACACCCTTCTCAAAGGAACCGTAC
GTGAGACTCTCGCCTCATACGGCTCCGTCCTGGAATCTGGACCCCCCTTTTCCTTTGACCAACGGGTCCTCGAACCCATGGGGGTTACGAATCATTCATC
CATTGATTGATTCAAGGTAGCTTTAGCCATTGTGGGTAGAAGCTAGTCGCCAGAAGCGAAGCAGCGATCTTCCGGGCCGGAAAGGTTCTATTTTTCTGAC
GCGTAAGCTACCGCAAAATGAATGAAGGAAAAAGGCCTCAGGATTAGAAAGACTAAAGAGGCATGGAGGGCCGACTACAAGACTACGACTACAATACAAG
CCATGAGCGATAGCGAAGCCTTCAGCCTTTTTTTTCGAAAGCCCCACAACTAGCTATCTTATAGTAGATAAGGCAAGCCTACTCAACTAATCTCATGTAA
ACGCCTGTTCGCTAAAATCCAAATAGAAAAAGACAACTACTTATTAAACATGTAGTTGAGTGCTGTTTGGGAACTCAGCAAGGGTCTTACCACCTTCTTG
ATTGACTATATTTGAGTCTTTGGGGTACTTTAGGATTATATTCCGCGCCAAAGATTTGTGCTTGTGGGCTAGGGTGAATATAGCGAACCAGCGGATCTGG
TAGTTGACAATCGTTCGGACTTGGTAAAGGTTGTCGTAGCACCTGTAGTAGGACAGAGGACTTATCGCGATGCCCGCGGACCAATTTACTATGTCTCTGT
CGCTGACGTTGGTCAAAGAGGCCACGTGGATTGGCCTGGGTCTTCTTCGGCTAATGAGACCTCGATCCCGAAGCCTTCGGAGTATCTTTTTGATAGGCGC
CTCTATCTGTATGGGGAATTCGCTGCTGAAAGATCCCGCCCAGTGTCCCCTTCCTTCCCCCGCCGCCTTCCGACCAAAGGGAGTATACAATTTCTTCTTC
AGGACACTCATGCCCGATCGTGAGACTGCCTGTTGAACGCCTGATGGCACCTTGCTCTGACCTGAGCTATGCAACAACGAGATCCCCCTCGATCTTTGCC
GGATGTGCTTGACGGTCCCCCATAATACGCTAACTTGGGGACTTTTTAGTCCATCTTTTCCAAGAGTCTCCGCTAGTTGAACCGCGTCCAGTAGACGACC
TCTTCCGCTCATCCCCTTCGTCAGCTCTTTGATAGGGATACTATAACCTAGGTCCCTAAACTTGGAATGGATGGCGGAGCGTAGGTGGCAGGCAGTTATA
TGGATACGGTGCTTTACCCGTAGACGCTTCTCCAGCTCTCGCAAGAATTGTATGGGAGTCGTCCTCGGGGGGACTTCCCGAATGACCGTACCGGGGAATT
CTACCGTACTCCGTGCAGCTATGGTTGTTGATCCTGCGGAGCCTACCCAAAGGTTCAGACCGGATTGTAGGAAGTGGGTGATACGTTTTTGTATTTCTAT
GAGAAGAAATACGGCACCCACGATTCCCAGTAGTAAGTCGTCGGCATATCGCGCGTAACAAATCCTTATTAATAAGGAATGCTTTTAAATTGGGGAAGTG
GGTGATACGTTTTTGTATTTCTATGAGAAGAAATACGGCACCCACGATTCCCAGTAGTAAGTCGTCGGCATATCGCGCGTAACAAATCCTTATTAATAAG
GAATGGCTTTTAAAGGGGGCCAGCTTACGGGCCAGGCCTCTCTCTGACCTGATAACTAGTATCGCCTCCCCGCCCAGCTCTATCAGCAGGCCCCTTCTTT
TGCAATACTTAAGAAGGTCTCTCATGGCCAAATTCTTATTAAAGCCTTCTCTACCATTGAATTCGGCCTTCGGGGTCAACCCAGCGGCTTCTATGAGGAA
GGCGGCGCAAAGGAGGCTTGAGGGCTTGTTAAGGAAGGCGGCTAGGGCCGCTGAAGGGGGGAAAACGAAAGGCGTTTTCTGGTCTCCCCTTCGC