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Detailed information on CNT30680517


BLAST search results

BLAST vs Swiss-Prot:
sp|P25414|RBL_AEGTA, E-value = 2e-143

BLAST vs NONCODE:
NONMEST005601, E-value = 6e-142

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3089355Triticum urartuVigna radiata84.2983.7282.77499forward
CNT30265852Triticum urartuBrassica rapa17.423.5785.44103forward

Expression of CNT30680517

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIILCNDQDW*

Sequence

>CNT30680517
ATGAAATGACACCTAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTTCACCGGT
TTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAA
TCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCGT
ACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGC
ACGTAGGGCTTTGAAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAACAG
ATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCATCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACATC