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Detailed information on CNT30680463


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 2e-75

BLAST vs NONCODE:
NONCQUT008675, E-value = 1e-97

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678773Triticum urartuSetaria viridis63.1474.0187.21430forward
CNT30287202Triticum urartuTriticum aestivum50.0747.4399.71341forward
CNT3052962Triticum urartuAmborella trichopoda26.8722.5187.98183forward
CNT3024873Triticum urartuPopulus trichocarpa49.0559.2289.52334forward
CNT3039699Triticum urartuMarchantia polymorpha69.0255.2381.7470forward

Expression of CNT30680463

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSRTAKRPRGGYWAKVTTMPGLMTPVSTRPTGTVPMPPILYTS*

Sequence

>CNT30680463
GGCAACTATATATAGTAGCAACATTAACTGACGAAGTTTCACCAACACAACCGAACGATACAATGACAGAGCAATAAGCAGTTCCAACACTGCTCGACAC
AAATAACCGAAGCTTAACAAGTTTTCAAAACAACTAGAACAACTATCACCACCACCAAATACCGCCACCGCCACCATAGATGCAGTAAAGAACCTGACAC
CATCTCATTTCTTCTTGGCCGCAGCCTTGGTCACCTTGGCGCCGGTCGGATCCTTCTTCTCCACGGCCTTGATAACACCCACGGCAACCGTCTGCCTCAT
GTCACGCACAGCAAAGCGGCCCAGGGGAGGGTACTGGGCAAAGGTGACAACCATGCCTGGCTTGATGACTCCAGTCTCAACACGCCCCACTGGCACAGTT
CCAATGCCGCCAATCTTGTACACGTCCTGAAGGGGAAGACGGAGGGGCTTGTCTGAGGGCCTCTTGGGCTCATTGATCTGGTCCAGGGCCTCGAGAAGGG
TGGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCGAACCCAGAGATGGGAACAAAGGGAACCTTGTCAGGGTTGTAACC
AACCTTCTTCAGGTATGAAGAGACTTCCTTGACAATTTCTTCATAACGGGCCTTCGAGTACTTGGGAGTGGTGGCATCCAT