Detailed information on CNT30680400


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30298710Triticum urartuTriticum aestivum15.6675.7397.88802forward
CNT30435920Triticum urartuAegilops tauschii17.7773.0384.84910forward
CNT30664560Triticum urartuTriticum dicoccoides9.7381.1198.59498forward
CNT3079106Triticum urartuBrassica juncea1.1121.3589.4757reverse complement
CNT30214058Triticum urartuHelianthus annuus1.1121.5989.4757forward
CNT30107453Triticum urartuOryza longistaminata1.042088.6853reverse complement
CNT3035140Triticum urartuCucumis melo1.0421.5488.6853reverse complement

Expression of CNT30680400

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MMCDSNMGILSYGLPYYGHLGASCSNIGRIRTKKNIAVGTLLIGTLPNSLGGFLIVFKS*

>peptide 2 (56 aa)
MVPWWNCCTVSRWPRCRAVALEGASLMQTQQEKEQEHTYRQRSARSSVHAEEYRRC*

>peptide 3 (54 aa)
MAIILSMDMIYSIIEGIVPSRCRLTTRHLRATLFKLRLYQICKSHVAASMHHGG*

>peptide 4 (51 aa)
MTTRHLGATGDMHIREKKSSNSQFGVDQINPVSATIMTRHHLFITRQFWQS*

>peptide 5 (96 aa)
MHPVYFLHIHFFKGAITLPCKFLNAGQVVYCKRDYYITELLNNSYRFISRPNMESLKPTPRVILRLGGYNNMTRELRVIGGNDNPVPEDTATLMKI*

>peptide 6 (74 aa)
MGSVAASSARLRGAAARPTVSLAGGKMGAITASGARLRRTQGHAKVLSSPLRGRWCHGGTAAPSAGGRDAAQSH*

>peptide 7 (61 aa)
MPRFCPARSVGDGAMVELLHRQPVAEMPRSRTRRCELDADSTGKGARTYLQTTKCQELRPC*

>peptide 8 (50 aa)
MRRPVPQRPRRTQGCRCPRTTAVIAATSPKQATMKYNSLAQDSSFDGLWN*

>peptide 9 (46 aa)
MHPGGNDKDLKMIRCRFRKIFNPEHNLSSLFLCLFYRIGLTWINPN*

>peptide 10 (35 aa)
MLKNTVDVDPRRGQFSVNLDLFSSHPGWVTMEINW*

>peptide 11 (36 aa)
MTRPLGATLVEVFMSVRQLQVPGCCKHDNPALGGYR*

>peptide 12 (36 aa)
DSTAREDYGVVKSGVRAVASGKTRDFAATPARLRRT*

>peptide 13 (43 aa)
MGVQTKTLVFFSRRWFRLHLTRMLGQLFLTKVVYTGVCPHHMV*

>peptide 14 (29 aa)
MSQDYSGYSSHKSKASHYEVQFLGTRFKF*

>peptide 15 (31 aa)
MGELPPCGLDNIDSPDPCLLAAQWTCKLTSL*

>peptide 16 (33 aa)
MVEIILYDVIINKLYTKSQLSIILLSRPLRATR*

>peptide 17 (33 aa)
MTWLTRPSARITAPTIDSSIHTGLQRRGQLICD*

Sequence

>CNT30680400
TGATTCCACTGCAAGAGAGGATTATGGCGTGGTGAAATCCGGCGTCCGGGCTGTGGCCAGCGGCAAGACCAGAGATTTCGCTGCTACCCCCGCCCGTCTC
CGACGCACTTAGTGAACTGGAGCTATCGCGGGTAGCGCCATCAGTCTCCGGCGCGCTTCGCCGCCGGGAGCCGTGGGGTGGGTTTAGAAGGCGGTGAGAC
GGGAGTCGTCGCCACTAGCTAGCGTCGCGCACCTTCGGCATGCTGAGCTGCTGGGGCCGTGGTCTTAGCTGGAGGAAAGATGGGATCCGTCGCGGCTAGC
TCTGCTCGCCTCAGGGGCGCTGCGGCACGCCCGACCGTGTCCTTGGCCGGCGGCAAGATGGGAGCCATCACGGCTAGTGGTGCCCGTCTCCGGCGCACCC
AAGGCCATGCCAAGGTTCTGTCCAGCCCGCTCCGTGGGAGATGGTGCCATGGTGGAACTGCTGCACCGTCAGCCGGTGGCCGAGATGCCGCGCAGTCGCA
CTAGAAGGTGCGAGCTTGATGCAGACTCAACAGGAAAAGGAGCAAGAACATACCTACAGACAACGAAGTGCCAGGAGCTCCGTCCATGCTGAAGAATACC
GTAGATGTTGATCCACGGAGAGGACAATTTTCTGTCAATCTTGATCTATTCTCCTCCCATCCGGGGTGGGTAACAATGGAAATAAATTGGTAGGACAAAG
GATGAAGCCACGAAAGAGATTTTGGCGGCAATCTGTTGTTACGCGGGAGAGAAAGATGTGGTTTCGCTGATTTTCTGGAACCTAACTGCAATCAGAGAGA
TATGCTGGGTTGTTTAAGTGGTGGGGTCCACCAGGACACGTGCTGGCCTCTGATTCGCCCTGCACGATAGTGCGTGCTGGGAACCCAGCAGGAGAGCCCG
ACCCGGTAACAATGAAAATAGATTGGTAGGACAAAGGATGAAGCCACGAAAGAGATTTTGGCGGCAATCTGTTGTTACGCGGGAGAGAAAGATGTGGTTT
CGTTGATTTTCTGGAACCTAACTGCAATCAGAGAGATATGCTGGGTTGTTTAAGTGGTGGGGTCCACCAGGACACGTGCTGACCTCTGATTCGCCCTGCA
CGATAGTGCGTGCTGGGAACCCAGCAGGAGAGCCCGACCCGGTGGCCCTAACAGTAACTCTATGAGGCGTCCAGTCCCGCAACGGCCACGTCGCACACAA
GGCTGCAGATGTCCCAGGACTACAGCGGTTATAGCAGCCACAAGTCCAAAGCAAGCCACTATGAAGTACAATTCCTTGGCACAAGATTCAAGTTTTGATG
GACTCTGGAATTAACGACGGAGGAAGAAAACAGAAAGGAAAACAGCCAGGGGATACTAGTACAAGTAATACTAATTGGTGAACAGTATAAATATTTTATA
CTGCCTCACGCCAAGGCATCTTCAAGTGGATTCATCAGGATTAATATTCAATACATGGGAGTGCAAACCAAAACACTGGTATTCTTTTCAAGGCGCTGGT
TCCGCCTTCATCTGACGAGAATGCTAGGACAATTATTCCTTACAAAAGTGGTTTACACCGGTGTTTGTCCGCATCATATGGTTTAACGGACATGGGTGAG
TTGCCGCCCTGTGGCCTGGATAACATTGATTCACCGGACCCGTGCTTACTCGCTGCTCAATGGACGTGCAAACTGACGTCTCTATGACCCAATTGACATC
AACATGACGTGGTTGACTCGCCCGTCCGCGCGGATTACCGCGCCTACGATTGACTCATCTATCCACACCGGCTTACAACGCCGCGGCCAACTCATCTGTG
ATTGATTTCAGCTTCACGGTAGGCAACAGCAACTCTGTGGCGGATAAATTCCGGCTTAACATATCAGGTGAAATGCATCCGGTATATTTTTTACATATTC
ATTTCTTTAAAGGAGCAATTACTCTGCCTTGCAAGTTTCTCAATGCAGGACAAGTTGTCTACTGTAAAAGAGACTATTATATCACTGAGCTGTTGAATAA
CTCATACCGGTTTATATCACGGCCAAATATGGAGAGTCTCAAGCCAACTCCTCGAGTAATCTTAAGACTCGGGGGCTACAATAACATGACTCGGGAACTC
CGGGTCATTGGAGGGAATGATAACCCGGTTCCGGAGGACACCGCCACATTGATGAAAATTTAAAAGCCGTTAGAACATTGTCAGTTCAAAATAAAGATTC
CGGTTTAAAATCCGGTTCAAGAGACATCTCTCTCCTGCAAAGCTTTGAAGCTCTCAAATCCGGTTCGAACATCCGGCTCAAGGTAAATTTGTCTCTTACA
AATCTTTTAAGCTCTCAAATCCGGTTCAAACATCCGGTTCAAGGACAATCTGTCTCCCACAAAGTTTTGAAGCTTTCAAATTCGGTTTAAAGTTCCGGTT
CAAAAAGAATTAATCTCTCGCAAGATTCGAGTTCTCAGAAAAATTAAAGGTTGCCAAAGAGAACTTGCTGCCATGATGTGCGATTCAAACATGGGTATCC
TGTCTTACGGCTTACCTTATTATGGTCACTTGGGGGCTTCCTGTTCAAACATAGGTCGTATTCGAACCAAAAAGAACATAGCTGTCGGTACCCTCTTGAT
CGGCACACTGCCAAACTCACTAGGGGGCTTCTTGATCGTATTCAAATCATAGCTTAACCCCTTTTGGGTCCGACTTGGATCGTATTCGAATCAGGGTCGT
TAAAAATCTCTCAAGGTCATTTGGGGGCTTCCTGTTCAAACATAGATAGTGTTCGAACCAAAGAGAACATAGCTATCGGTACCCTCTTGTTCGGCGCAAC
GCCAAAGCCACTGGGGGCTACATGATCGTATTCGAATCCTAGCTTAACCCCTTTGGAATGGTTTACTGATCGTATTCGAATCAGAAACCTCAATTTTTAT
TTGGTTTAAGTTTTTTGCAAACAATATTTGGTTTTGTCTTGAGACTTTTTTGTTCAGATCTAAGTATAAGTGTGGTTTCATTTAAACCCGGCTTGGCTTT
GGACGATAAAGTCGCCAGCATGTGACAATCATCATATATTTAGAAGTATTGGCTTCTAAGGATTGGGTTATCACTCTTATTGCACAGGTCATGTAAACCG
GCAGTACAAATTGAATATCACATTGGTTATATGTGGGATATTATGACCCGCCCTGCGGTAAACCACCAAGGGGTCTTGTGATTTACTTGTGTGCAGGATA
AGACTGTGGTTAACCGCCCTGGCTTTTGACGTTAAGTCGCCAGGGCATATGTTGTCTAAACTCTATGCAGGATTTACAGAGCTATGACTTACATAAATGA
TTAAGTTCCAGCCCATCGTCAAAGATTGAAATTGGTGTCCCAAAAGGGTTATCAATTCTTGATTTTCTCAAAGGCTATAAGCCGCCGGGTTATAAAGATT
CCGGTTTACAATGGAGGTGTATTAAATCGTCATCGGCCAAGAGCCGCCGGGTATTTAAACTCCGGGTTTACTTATCAATAGATGAGGTTTTCATAGTCGC
TTTAGCGCAATGGCTATTATATTATCAATGGATATGATTTATTCTATAATAGAAGGAATAGTCCCGAGTCGCTGCAGGCTTACGACCCGGCACTTGAGGG
CTACATTATTCAAGTTGAGGTTATATCAAATATGCAAGTCTCATGTCGCTGCAAGCATGCACCATGGGGGCTAATGCAAAGTCATTTTTACTAGCCTTCT
TGAAGATCCGACTCATCATATCATAATGAGCCGGCCTTGGGGGCTCCCAATTGCTCCTGTCAACAATTCAAGGTACACAACCTTCAGCCCATTATATTGA
AAGATCCACTATTTAGTTGGTAGAGTACAAAGCTCTTAACCTTGTGGACGTGGGTTCAAGCCCCATGGTGGAGATCATATTATATGATGTTATTATCAAT
AAATTATATACAAAGTCCCAGCTCAGTATTATCTTACTAAGCCGTCCCTTGAGGGCTACACGTTAATGTTCAAATTTACATGATTATATCTACAAAGTCC
CTGCTCATTATTGCATAATGACCCGGCCCTTGGGGGCTACACTGGTTGAAGTTTTCATGAGCGTAAGGCAATTACAAGTCCCAGGTTGCTGCAAGCATGA
CAACCCGGCACTTGGGGGCTACAGGTGATATGCATATAAGGGAGAAAAAATCTTCAAATTCTCAATTTGGAGTAGACCAGATTAACCCGGTGTCTGCAAC
AATCATGACCCGACATCATTTGTTTATAACCCGGCAATTTTGGCAATCATAAATCGGCAAGATCTACATCTTTAAGCCGGTTGAATATCAGTTGAATATT
TCAAGACCAATATTTTGGTCAAGTCAGATCATTGAAGGCCGATTCAAATGGATTATTTCTTATAATACTTCTCAACAAGAGCCAATGTCAGCAAATTGCT
TATGAAGCTGGCTTATTGACCTGGATTTTTTGAGAAGAAGTGCCTGGATTTTTGCATTGGCAAGGTTTGGACATATCTGTTAAAAGTGATTTGCTATAAG
ATCTTTGAGTATGCATCCAGGAGGAAATGACAAGGACTTAAAGATGATTAGGTGCCGGTTCAGGAAAATATTTAACCCGGAGCACAACCTATCAAGTTTG
TTCTTGTGTTTATTCTACAGGATCGGTTTAACATGGATAAATCCAAATTAAAGTGGGGGCTAATGTCGGGGATATACCCCGCGGTATGACCCGGCCAGAA
TCATGACCTGGCCAGACTTGGCGACTCACCAGAGACCTGGCTAGAGCTTGGCGACTCATTGGCGATCCGCCCGGACATGGTGGTTTACATGTAACCCGTC
TGGACATTGCAACTCGCTGAGACTCGGCGGGCGGATCAGACGGACGACAAGGCCCAAGGCCCAGCAGGCCAGCTTATACTCTGGTGGGCCGGCTTAAGAG
GAAAGGGATGACGAATATTTCCTTTATGAGGAAGCAAGAACCGGACTTGTATTCAACTTGTAAGAAAGGATAGACTAGTCCCAGTCCTACTAGGACTCCA
CATGTAACCCGCCCCTTCAACATATATAAGGAGGGGCAGAAAATAATCTCTAGGGGTAGACACAAAGGGGGAGCCGGCTTATGCGGCAACTCTCTCATGA
GCATAATGAGATCTAGCCAC