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Detailed information on CNT30680387


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 1e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30150971Triticum urartuBrachypodium distachyon84.3631.9283.77302forward

Expression of CNT30680387

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MACICVTSTCTLGLARFLAAWWPEGNEADALHLAHVVEADDADIGSFHIVQYRPS*

Sequence

>CNT30680387
CGCTGCCGACAAATGTGAACTAACATGGCATGTATATGCGTTACTTCAACTTGCACTTTAGGCCTTGCCAGATTCCTCGCAGCCTGGTGGCCTGAAGGCA
ATGAAGCTGACGCACTGCACCTGGCGCATGTTGTCGAAGCCGATGACGCGGACATAGGCAGCTTCCACATTGTCCAGTATCGACCGTCGTAGTAGCCGGG
GGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCGACCTGCTTTAGGAGGGCC
TCAGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCG