Detailed information on CNT30680248


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005924, E-value = 1e-58

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30220769Triticum urartuHordeum vulgare87.8825.8491.19261forward
CNT30395374Triticum urartuTriticum turgidum91.5825.6898.16272forward
CNT3017910Triticum urartuZea mays65.998.1390.31196forward
CNT30585663Triticum urartuEchinochloa crusgalli65.9932.1888.27196forward

Expression of CNT30680248

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVYPNFKNKNLFFNLFVRKREESQETLILDFNNKK*

>peptide 2 (52 aa)
DIGSINFSFQHKICRSGKNEISTIMSYMYCRHQTKQWFIQTSKIKIYFLICL*

Sequence

>CNT30680248
TGACATTGGATCTATAAATTTTTCTTTTCAACATAAAATTTGTCGATCTGGTAAAAATGAAATTAGTACTATAATGAGTTATATGTATTGTAGACACCAA
ACGAAGCAATGGTTTATCCAAACTTCAAAAATAAAAATCTATTTTTTAATCTGTTTGTGAGAAAGCGTGAAGAGAGCCAAGAGACTTTAATTTTGGATTT
CAACAATAAGAAATAAGAAAGAATTTTACGAATTGTACAGACGAATTCGAATTAGCCAATAAATTGGCTATCGTTTTTTTTTTTTTTTTTTTTTTTC