Detailed information on CNT30680010


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 3e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690198Triticum urartuOryza sativa97.8416.780.11362forward
CNT30674806Triticum urartuSetaria viridis30.5426.9787.61113forward
CNT30222581Triticum urartuHordeum vulgare23.7836.6789.7788forward
CNT30552096Triticum urartuOryza glaberrima40.2725.683.89149forward
CNT30580303Triticum urartuEchinochloa crusgalli21.3516.8892.4179forward
CNT30497368Triticum urartuDigitaria exilis61.6247.380.7228forward

Expression of CNT30680010

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVATSLMNTSPSPVEFSSILTATGTPFGSSPLYTLPN

Sequence

>CNT30680010
GATATTGTGAGGCTTAATGTCAAAGTGGAGGATACGCTGGTTGCACCCTTGATGTAAGTACTCCATTCCTCTGGCGATGCCTAACGCAATATGTAGCAGC
TTGTCTGGTACTAGAAGATTCTGAAAAATATTAGAGTCATCAGAGAATATGTATTTCTCCAGTGACTCGTTAGGCATGAATTCATAAATAAGAGCCCGTC
TCATTCCTTCGGAACAAAATCCTAGTAGACGGACAATATTGGCATGGTGGATTAGTCCGATGGTTGCAACTTCATTGATGAATACTTCTCCCTCTCCTGT
AGAGTTCTCTAGCATCTTGACTGCTACAGGCACTCCATTTGGTAGCTCGCCTTTGTATACACTTCCAAAT