Detailed information on CNT30679870


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 3e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693708Triticum urartuOryza sativa25.7333.7684.32185forward
CNT30435258Triticum urartuAegilops tauschii39.0898.9497.86281forward
CNT30656050Triticum urartuTriticum dicoccoides85.410099.84614forward
CNT30130278Triticum urartuLolium perenne39.2232.1692.2282forward
CNT30720193Triticum urartuTriticum spelta63.783.8890.39458forward
CNT30338878Triticum urartuEragrostis tef21.4219.7485.06154forward

Expression of CNT30679870

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MSVEPRGVALDRWCACCRTRVGWYLRVERETAAEAGRTASLRPEMELPARPRTATGWTATSDAIAIELYVRIPWACPGSGAAGYVH

>peptide 2 (74 aa)
MVCVLSNSCWVVPAGGAGDGGGGGPDGELAAGDGAAGQAPHGDRLDGDERRHCDRAVRAYTVGVSWFWSCGVRAH

>peptide 3 (87 aa)
MPCQLSHAVLLSIDGVRAVELVLGGTCGWSGRRRRRRAGRRACGRRWSCRPGPARRPAGRRRATPLRSSCTCVYRGRVLVLELRGTCT

Sequence

>CNT30679870
GTAATTGCATGCATCATGCAAGCAGCATCTTCCCAATTACTGATACGAAGTAGTACAAAGATCAAGTATCAACAGAGGACATAGATAGGGCCATAGGGGG
GAATCCATCAGATCCATGGTACACAAGCACGAGGCGAGAGGAGGAAGAAGGCCTTGATTGCAGATCTACTTAGATCTTGCCACGTGGCCCCGGGGTGGGG
GGCAGCTGGGGCCCCTTCTTGATGGGGAGCAGGTCGGGGGAGGCGGTGGCGCTGACGTAGGCGAGCAGGGAGCCGCCGCCGAGCAGCAGGACCTTGAGCA
GCAGCCCTCGCTTGGTGAAGGGCGCGGCGAAGGTGTTGAAGAACTTGCTCTGCAGGCCGTTGTAGGGCGACGCCGCGTCGCTGCCGTACAGGTCGAAGTA
GACGCTCTTCTCCCCGTACTTGGCCACCACCGCCGCCCCGCGAGCCCTGCGTTCATGCCATGTCAGTTGAGCCACGCGGTGTTGCTCTCGATCGATGGTG
TGCGTGCTGTCGAACTCGTGTTGGGTGGTACCTGCGGGTGGAGCGGGAGACGGCGGCGGAGGCGGGCCGGACGGCGAGCTTGCGGCCGGAGATGGAGCTG
CCGGCCAGGCCCCGCACGGCGACCGGCTGGACGGCGACGAGCGACGCCATTGCGATCGAGCTGTACGTGCGTATACCGTGGGCGTGTCCTGGTTCTGGAG
CTGCGGGGTACGTGCACAC