CANTATAdb - search

Detailed information on CNT30679719

BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 4e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30383589	Triticum urartu	Triticum turgidum	54.89	55.32	99.05	421	forward

Expression of CNT30679719

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MMLQFEPPIMCAVHRSCLDIWLQLAASERQRLTCRGQSLWQTPMRCC*

>peptide 2 (85 aa)
MHEAGVAQVVEATLAEDLGTGLEPYRLAELDAVACKKLGEDASKRTEHGPPAVDHLELPVLGKGLGVGREPGGVEHTVGTVPWAA*

>peptide 3 (31 aa)
MRYPSTAPMSTTWHAQIARMLCACTRLGLPR*

>peptide 4 (38 aa)
MPLDRRPSPVGRSCPRGRVGRLPHRVGRQQCGTPQQRP*

Sequence

>CNT30679719
CATGATGTTACAATTTGAACCACCCATTATGTGTGCAGTTCACCGCAGTTGCCTTGATATATGGCTACAACTCGCAGCTAGCGAGCGCCAACGCCTCACT
TGCCGGGGACAAAGTTTGTGGCAAACGCCCATGCGTTGTTGTTGACAGGGTCGGAGAGGTGGTCAGCGAGGCGACCGTTCTTGACTTCCTTCACCTTGAG
CTCCGCGAATGCCTCTGGATCGTCGGCCAAGCCCAGTGGGTCGAAGCTGCCCCCGGGGTAGAGTGGGTCGACTACCTCACCGAGTGGGCCGCCAGCAATG
CGGTACCCCTCAACAGCGCCCATGAGCACGACTTGGCATGCCCAAATAGCAAGGATGCTTTGTGCATGCACGAGGCTGGGGTTGCCCAGGTAGTCGAGGC
CACCCTCGCTGAAGATCTGGGAACCGGCCTTGAACCATACCGCCTCGCGGAACTTGACGCCGTTGCGTGCAAGAAGCTCGGGGAAGACGCATCCAAGCGC
ACCGAGCATGGCCCACCGGCAGTGGATCACCTCGAGCTCCCGGTTCTTGGCAAAGGTCTCGGGGTCGGCCGAGAGCCCGGCGGTGTAGAGCACACGGTCG
GCACCGTACCATGGGCTGCCTGATGAAACCGGCTTGGCCTTTGCAGCGGTCTTGCGCATAGTGACACGGGCCTCACCAAAGAGAGCTGATGAAGCCACGT
TCTTCACCGACTTGCCGGCGAAGGTCGAGGAGAGGGACATGGTGGTGGTCGCCATTGCGCTGCTAAG