Detailed information on CNT30679693


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000340, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617948Triticum urartuSesamum indicum98.5377.3396.011003reverse complement
CNT30730404Triticum urartuCorchorus capsularis98.7269.1295.721005forward
CNT30257501Triticum urartuAvena sativa61.210099.52623forward
CNT30657465Triticum urartuTriticum dicoccoides80.3549.6795.72818reverse complement
CNT30434077Triticum urartuPapaver somniferum99.3190.8495.451011forward

Expression of CNT30679693

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEPSLRS*

>peptide 2 (44 aa)
SCFRHRYFEELECSKQAIALDTLAWDNIIGFRSYCVGLRDRSND*

>peptide 3 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 4 (56 aa)
MPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGSRRRGRFAAPDVARSPLNLII*

>peptide 5 (35 aa)
MPTRDRRMLLIGLRRHLMRNQIFGFRGEYGRKAET*

Sequence

>CNT30679693
GTCGTGTTTCCGGCATCGTTACTTTGAAGAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCC
TATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGAC
GAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAA
CGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAATCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGC
TGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGACATAGCAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGT
TCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGCCATCCCTCCGCAGCTAGCTTCT
TAGAGGGACTATCGCCGTTTAGGCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTAT
TCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAAT
GCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTC
GGATCGCGGCGACGGGGGCGGTTCGCCGCCCCCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTA
GGTGAACCTGCGGAAGGA