Detailed information on CNT30679583


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000950, E-value = 8e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690828Triticum urartuOryza sativa13.9423.6696.15650forward
CNT30374070Triticum urartuArabidopsis thaliana7.16100.394.61334forward
CNT30501325Triticum urartuCoffea canephora14.4829.1793.63675forward
CNT30618776Triticum urartuSesamum indicum11.8226.6892.92551forward
CNT30401845Triticum urartuBeta vulgaris3.1721.5485.14148forward
CNT30224228Triticum urartuHordeum vulgare17.1697.3297.88800forward
CNT30255597Triticum urartuAvena sativa4.9526.4695.67231reverse complement
CNT30231730Triticum urartuAnanas comosus3.0951.8100144forward
CNT30655384Triticum urartuRosa chinensis8.4147.6389.54392reverse complement
CNT30627396Triticum urartuDaucus carota5.1757.3891.29241forward
CNT3035046Triticum urartuCucumis melo14.3525.8485.95669reverse complement
CNT30104494Triticum urartuOryza rufipogon4.9310098.7230reverse complement
CNT30577701Triticum urartuOryza barthii5.333.5698.38247forward

Expression of CNT30679583

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MALCTQNRCVDQTALHLVSPSEHMDLPDP*

>peptide 2 (30 aa)
MGPFIEKLRIPRSFEDGAPVTLLRMESSLD*

>peptide 3 (30 aa)
MIRNIAKESEMSYRRPNLGNPRCLHFMYPS*

>peptide 4 (49 aa)
MLLQLFSRGPSWRAIPVRGREQDSKRAYLCSLLFHQAQKFKENCRSVAT*

>peptide 5 (53 aa)
MSPSPVSPHLCRVDRSTPAAQTHFGPIGPYIIGDRTAAPRLTRPTCYNYSINT*

>peptide 6 (42 aa)
MDCKISFLAFFFFCARFSHAFSTADRLQGFALRPHCVNTTSR*

>peptide 7 (42 aa)
MRRTHDLQTTIERANQERKNLETNPRANTKQSKKEEGPKAAY*

>peptide 8 (66 aa)
MGGLVIYCAFLLRTFWYVLPPNYRSDPPDQKLNSALLLSRRTYPPQGFVEFPFLNCVGGNLPKLGR*

>peptide 9 (77 aa)
MIVFFHQRPFFAGTKSPLTTNQQTSSSGWVLPVSTTRKKNQMETATNYGSWPRQRPRRRGDQNKKSRLDDDARPGLQ*

>peptide 10 (55 aa)
WLFACVLIFLPHSKTSVTECSSIQIGMIPSILPELGTCFRMRIFDRDRSFSLAIN*

>peptide 11 (58 aa)
VVRLCAYFPSPLKNKCYRMFFNSNRYDPVHPSRARHLLQNENLRQRSFLQFSNQLDPY*

>peptide 12 (30 aa)
MKGRTARFALQPGRVSLPDQCAGRTIYKQQ*

>peptide 13 (33 aa)
MRCEEKHLFFMTSTSRSRPGKVTDPLMNERKGL*

Sequence

>CNT30679583
TGGTTGTTCGCTTGTGTGCTTATTTTCCTTCCCCACTCAAAAACAAGTGTTACAGAATGTTCTTCAATTCAAATAGGTATGATCCCGTCCATCCTTCCAG
AGCTAGGCACCTGCTTCAGAATGAGAATCTTCGACAGAGATCGTTCCTTCAGTTTAGCAATCAATTAGATCCATACTGACTTAGCTTGAAGCATGGCTTT
CCGTTTCGAGGCTCGATGCTACTCTTGGGAACATTATTGATACATCGACTTTCAAGCATCTCGTAGTTGAGCGGTACTGCCATCAACAGTACCAAGATGG
AAAGGGACTGCTGAACATGGATAGAACGAGAGTCGAACTCGCATGTCTCTCTTTTCCTGTTAGTTAGGAAAGAAAGCCGATATAAACAGCTCCATATTAG
CGAATTGCCTCTGACTACTCTTCCCAGGCTGGTCAAACTATAGGATTCCCATTCACTTAGTAAACTTATTGGACAGACGGGTCAACCACTTGACCGAGGG
GAGTAAGGTTCGTCACCACAGTCCCGATAGAAGGTCGAGTTTAAAAACAAACCGAAGACAAAGCAACGAATGAAAGGAAGGACGGCTCGCTTCGCTTTAC
AACCAGGGCGGGTCTCGCTGCCGGATCAATGCGCAGGACGCACGATCTACAAACAACAATAGAGAGAGCCAACCAAGAACGAAAGAACCTGGAAACAAAC
CCGCGAGCGAATACCAAACAGAGTAAGAAGGAGGAAGGGCCGAAGGCGGCTTACTAAGCGAGAAGGCTCCAAGCAATAACGCATTAGAAGGGAGCTTGCT
GCTTTGCAACCTAAGCGGTATAGCTAAGCTTACTCATCAAGGGCCGATAGATAGAGCTGCTCTTGTTGCTAATGGAGAAAGATTGGAGTGAAGTTTAGTA
TGCTTTCTAAGATCAGAGGAGGAAAAGAATGAAGGTGTGGGCGGGAAGGAGGAGGCAAGGCCCCCTCAATGTGTATTCGACTACTCATTACGGAACCACC
GATTGATCCGATTAGACTTCCCGCGGGGTAGCGCGGGGAACTTGCTGAATCAACTCCTTGGAATCGGAGGCCTGACTGAGGGTCAATCCAATGGTAACCT
CAACCTAGGAATGCCTGTTTCACTTCCTTGACAGAGCCAACTGAGATGCTCTGTCTCGATGTTGACCTAACATGGATTGATTCTAAATTATGAATCAAAA
ATCCTGATCTCGCAAAGGATCCGCAATAGCTGTGTGTACTCGAGGACTCTTAGGGAAAGAAAAGCACTTTTCTCTCTCAGCAGTTAGACCGGCTATGGGT
GGGTTGGTTATATACTGCGCCTTCCTTCTTCGAACCTTTTGGTATGTATTGCCCCCTAACTATAGATCAGATCCACCGGACCAGAAACTCAATTCCGCAC
TGCTGCTGAGTCGTCGGACTTATCCACCTCAGGGATTCGTGGAATTTCCGTTTTTGAATTGCGTTGGGGGAAATCTACCAAAGCTAGGCAGATAGATAGA
CTCCTTTCCCGCTGCTAAGGGAGAGCAAGAAACTAAATCAAATGATTGTTTTTTTTCACCAGCGCCCTTTTTTTGCGGGTACTAAGAGTCCTCTCACTAC
CAACCAGCAGACATCATCATCTGGCTGGGTCTTGCCGGTATCAACAACGAGAAAGAAGAACCAAATGGAAACAGCAACTAACTATGGCTCTTGGCCCAGA
CAACGTCCTAGGCGTAGGGGAGATCAAAACAAGAAGTCACGCCTAGACGACGACGCCCGTCCTGGGCTGCAGTAAGTAGATCGAGAGGTCGTTCCGCCCC
TTGTCCCCGAAGATGGGTAATATGTTCTCATACAATGTTGCTCCAACTTTTTTCTAGAGGGCCTAGCTGGCGAGCGATCCCAGTCCGCGGCAGAGAACAA
GACAGCAAGCGAGCGTACCTTTGTTCGCTTCTTTTCCACCAAGCACAGAAGTTTAAGGAGAACTGTAGGTCGGTGGCTACCTAAGGAAACTCCGATTCGA
TCCGTCCCCGGGCTAGGAGGCATCTACCTCATCCCGATCACAAGGAGAGGTTCACCATGATGGGGGGTCAGGTACTTTAATTCTTTGCATTCCGAAAAGC
ATGAAATGCATAGGGGACCATCCTTTTTTTTGTGGCATGCTCTCTGATTTACGGATTCGCAGGGGGCCGAGGGCCAACCTTAGTTGACTGACAATGACAA
AGGCTTGCGAAACAAAGTAGCGCCTTTGAAATGGAATCTTAATTAACTATCAGTGGTGCGAAGCAGCTTAGCCCCGGGGAGCTAAAGGTTATACCTTTGT
AAGCGAACTGTGGTTCTTCTATGTAGGGTATTCCTCCTTTACTCTCTTAATTAACGTCGAGCTAAGTGACTTTGTGTAGCGTAGTAGAATGAAGGCTACG
TACGCACCGACACTCTCTTATCCCTAAGCCTCTTCGCTAACTCGCTCGCCTACAAAAATGAGTAGGCGAGGCTAGGCAAACTCAGCCGCTGACTTTGACT
GTACTGTAGTAGACTTTCTAGCCTTTTATTTTAGAACCCTTTCTCATGTTCTTTCATCCATCAAGTAGGCGAACCGTCAGGTCCTTAGTAGCGTTGACAA
AGAAGAAGAGCCGGTGAAAAAAAAAAGAAAGCTAGAATTTCCAATAGTGAGACCAGCTTGACAAGCTACCTTTCCTCTTGATATGAGGTGCGAAGAGAAA
CATCTCTTTTTTATGACTTCCACTTCTCGATCCCGGCCCGGAAAAGTGACCGACCCCTTGATGAATGAAAGAAAGGGTTTATGAGCCCTAGCCCTGTAAG
CCCACACCTGTGTAGAGTAGATCGTTCAACACCTGCGGCACAAACCCATTTTGGACCAATTGGTCCGTATATCATAGGCGACCGAACGGCCGCCCCCCGT
CTTACTAGACCAACCTGCTATAATTATTCCATAAACACCTAGCGAAGATATGGCAAACAAATAAAGTAGCCCTATGTTCGGATCTGACAATACCATACCA
TAATCAAAAGGTACAACGGCCCAAGCGACCAGACTTAACATAAATGTAGCCACTGGAGCCATTCTAAAAAGGGAGAAATTAGCACTACTTGGTGAAATAG
GTTCTTTTAGAATCAATTTCAAACCATCTGCTAGAGGTTGTAACAATCCGAACGATCCCACTACATCAGGACCCTTTCGACGTTGCACAAAAGCCATTAC
TTTACGTTCAGCTAGCACTAAAAAGGCTACTCCTAGTAGAAGTGGTAGAATTAAACAAAGTATTTCCGCTGGAACAGCTATGTACGTTTTCGATTTTCTA
TTCACTCATGATCGGGCCTGACCTGGTCGACCCGATCAAACTATTTCACTTATGATCTGGCCTGGTTGACCCAATCATGATATTGAAGGATGGGACCTTT
TATCGAAAAACTCCGGATCCCGAGAAGTTTTGAAGATGGTGCTCCTGTTACGTTACTTCGAATGGAATCCTCACTTGACTAAGCATAAGCGAAAACGTGG
CTGAGAGTAAGCAATCCCCTTTCCTAGTGGTTGAGTCATGATCAGAAATATTGCGAAAGAAAGTGAAATGTCCTATCGTCGTCCCAATTTGGGTAATCCA
CGATGTCTCCATTTTATGTATCCATCTTGACTCGTTTTCGGTGTATCGATAGTTCGTTGTATTACACTTTGAACTAACCTAGAGGCCGTCTTAGGCAAAA
ATCGATATCAGTGAAGTAATCCCGGAACTCTAGAAATCGTGAAGAATTTATTCCATTTTGTTAAATATCGCGAATATAGTGGAAAAAACTCTAGAACATT
CCTTTGAATGGAATTGTTCATTGGGTTCGACTTGTTGTTCGACAAAATAGAAAGCTGTCTCTCGTATGTTATTGTAAGGTGATTCATTCATAATATTTCT
TATGTGCGGTTTCAAGATGCTAAAAAAGTAGATGGTAATCGGCTTTTGAGCTCCATTATGTGGACTTCATCAATTTGTGAATTATGGACTTGGCGGTAGT
GGTCAATACTAACTGCACCGTCTAAATGCTCCCTGACCAAGTTTGCGTACTCGTCAGGGTTGAGTTGAGGGGGCAGCCCGTGCGCTAATTGGGCTTCGAG
GTGGCTATACGCGAAAAAAGCTCGCTTTCTACTGAGGCCTGTTCTGTCTAAACTGTTCCAGAATGTTATTTGTTTCATAGGAAGATTCCAAAAGCACATT
GATGCCGAAAGAATCTTCGGAACCGGTGGAGAGGCTATTCTGATTGAAGGCTAGACAAATAACATGACTGAGGTATGTAAATAAAACTGTGAAATAGCTA
TATAATATGATCTAAATAGAGAAGAATACCAAAGATAATGGATTGCAAAATAAGCTTTTTAGCTTTCTTTTTCTTTTGTGCGCGCTTTTCGCATGCCTTC
TCGACCGCGGATAGGCTACAGGGCTTTGCACTTCGGCCCCATTGTGTGAATACCACATCAAGGTGACAGGATTCGAACCTATGGCCCTCTGTACCCAAAA
CAGATGCGTTGACCAGACTGCGCTACACCTCGTCTCCCCCTCAGAACATATGGATCTACCCGATCCATAAAGAAAAGAACCACCGCTTTTAGGAAATTGT
GACAATTCTCTTTCACTTGCATTTTCTTTCGTGAAGGCTCGCTCTCGTTCTTCTTACATCTT