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Detailed information on CNT30679552


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36952|COX3_AEGCO, E-value = 5e-135

BLAST vs NONCODE:
NONBNAT000713, E-value = 2e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197849Triticum urartuPisum sativum37.5571.3193.81517forward
CNT30494334Triticum urartuOlea europaea7.8422.4590.74108reverse complement
CNT30442188Triticum urartuAegilops tauschii24.2610098.5334forward
CNT30481824Triticum urartuChara braunii6.7530.187.193forward

Expression of CNT30679552

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MPHKLVAQALPRRAVYHKIEFEPGAKAPTPPF*

Sequence

>CNT30679552
TAGTGGAGGGTGCTTGGTAATATTCCATTCCTTGAAAGCCAGTGGATACTAGAGCCAGTGAAACGGTTGCTACTAAAGCGTAAACTGCTCGTTTTTCCTT
CCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAGGGAGAATAGGGGTATTAAGAAGAGGGATTTCCCAAGGATCTAAAACCCCA
ATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGTAGGTGCCAAAGAAGAATGAGAAGAAGCCCAAAAAAAAGCAAAAAGGAACATAACCTCCGAGA
CTATGAAGAGAATAGAACCATATCGAGGTCCTAATTGTACAGCTTTTGTATGATGCCCTTCCAACGTGGATTCACGTAGAACATCCCGCCACCATACGAA
CATGGTATAAAGGAGAAATATTAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATGTACATCACACCTCCTACGGTGGTTGCCAAAGCT
CCGAGTGAACCCGAAATAGGCCATGGACTTGGATCTACCAAATGATAAGAATGCCTCTGAGATTCAATCATAAACCACTTTGCCCCGGTTGTATGTAAAC
CCCCCTTCACCCCCATCCCCTAAAGTGGTAAAGAAGGAGGCTCTTTTTTGTCTCATTAGGACAAAACAAATAGGAAGGGATAGTTCTTTCATTGCATTGA
TAGAAGTGAGACTATCAAAAGATCTCTCTATTATTTAGAGAAAAGAGTTGGCGTGGGTTCTACCAACGAAACGAAGAAGTTTTGGATTGGTTTTTATCAT
TCGGAACCCTCTCCGTATTAGTAAGAAAAACACACCCAGACTCTTACTTCAATGGTGGGAACAACCTCAGCGGCGTGAACATGAACAATCATTCTATGCA
AAATTTCATGTTAGGAAGAATAAGAAGAATCTCATTCATGTGTTCATGCTAACAGAAGAGCGGATCCAATACACATAAGACTTTTTGTCAGGAAATTCCT
AATGTAAATGATGAATTTGGGATGTCATGCCCCACAAGTTAGTTGCCCAAGCGCTCCCTAGGAGGGCAGTCTACCACAAGATAGAGTTTGAGCCTGGAGC
CAAAGCCCCAACCCCTCCATTTTAGGTTTTTATCTGGAAAGAATTTCAGGAAGTCATATCGGCCAGATAAGCCTCTGACGGCTCCATATTGATTTTTCCC
CTGTTTTCTTTCAGAAGAAGCAGGAGCCATTTTGCATTGAAACTCGGTATCAGCAGAGTCATCTCCTGAGAAAGACTTCTTTCTTATTTATACAAGATTT
CAGAGAACATAGTGAAGCCCTCAAAGCGCTAACAAAGTCGTAAGTAGAGAAGTTTTCCAAAAAGATACCTCGTTTTT