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Detailed information on CNT30679531


BLAST search results

BLAST vs Swiss-Prot:
sp|P93286|CCMFC_ARATH, E-value = 6e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3098138Triticum urartuSolanum tuberosum93.3594.6386.23828forward
CNT30622952Triticum urartuDaucus carota16.863.6891.28149reverse complement

Expression of CNT30679531

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MYSHFSRAPRFSNGKKVSSFWEHAKPEILMFVILHPPMQKIFQFSILI*

>peptide 2 (45 aa)
MIETSQTTTFLPHMEFGTQGQSLSELYLILTRQKNTQHKDAHSSM*

>peptide 3 (56 aa)
MVVYQPPVLELPVPIGAYRSVNGFVCIATSVVLLVSRMEKKYLLSGNMLNQKFLCS*

Sequence

>CNT30679531
CTATTTTGACTCCTTTTATGCAATTATGAACGAAACTTTCTCGATTCCAATGCAACTTATCCTTTTGGAGTTGACGTAACAAACTACGCGAGCCTCCCGA
TGAAGCCAACAGAAATCCTATCCGAATACTAAAAATAAAAGGCAATTTCATTATGGTGGTATACCAGCCGCCAGTTCTGGAACTTCCAGTTCCAATCGGA
GCATATAGATCCGTAAATGGATTTGTATGTATAGCCACTTCAGTCGTGCTCCTCGTTTCTCGAATGGAAAAAAAGTATCTTCTTTCTGGGAACATGCTAA
ACCAGAAATTCTTATGTTCGTGATTCTTCATCCACCGATGCAGAAAATCTTCCAGTTTTCCATTCTCATATGAGGCAGGAAAGTTTATGGGCAACAGGTC
GGCACGAAGTGATTCATCATGTTCAAACATGAACCTTTCGCTCGTTGGGGACGGTTTATAAATCATCAAATTCCCACAAATGGAATGAGAAGTGGGTCCA
TGTAAATGATCGAGACCTCGCAAACAACAACGTTCCTTCCCCATATGGAGTTCGGGACCCAAGGGCAATCGTTGAGTGAACTGTATCTTATTCTCACACG
ACAGAAGAACACCCAACATAAAGATGCACACTCCTCCATGTGAAATAGAAAGATTCGTCTTCACTTTTTTGTAATAATCGTGACGAACAGCCATCAGCAG
TCGGCTCGTTGGTAAGGTGAGAGCTTCAAGCCCGCTTTCTGGTGGCACACCCCCCAAACAAGCACCACTCGACGAGGGGGTGCGGGGAAAGCTATAGGCC
CAAAACCTTCGACCCTTCTTTCTATATGGGGGTGCCCGGGGCACCTCATCTTGTCATTTTGTTGCTTATTCCCCTTAGGCTGAAGTG