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Detailed information on CNT30679488


BLAST search results

BLAST vs Swiss-Prot:
sp|A8Y9C3|RK14_LOLPR, E-value = 8e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30310337Triticum urartuCamelina sativa24.458.6286.81144forward

Expression of CNT30679488

Peptides detected in this lncRNA

>peptide 1 (44 aa)
SLVSISPTSIYNTSGANETILVKFNSLNSSAIAPKTRVPFGLPF*

>peptide 2 (35 aa)
MQKDERNIVFPERKTEHFFLSSIPLLGFYISKRIN*

Sequence

>CNT30679488
TTCTTTGGTCTCAATTTCGCCTACTAGTATTTATAATACTTCAGGAGCTAATGAAACTATTTTGGTAAAATTCAATTCTCTCAATTCCTCGGCAATCGCG
CCAAAAACTCGAGTTCCTTTTGGATTGCCTTTTTGATCAATTATAACCGCAGCATTGTCATCATAGCGGATTATTACCGTCTTCGCATTTGAACTCTTTA
CATGTACGTACAATTACAGCAACAATAACATCACCAATACGAGCATATCGCTGATTACCAGCAGCTCCTATGACTCGAATACACATCAATTTTCGAGCTC
CACTATTATCTGCTACATTTAAAAGGGTCTGAGGTTGAATCATATTATTTTGATTTCAATTTGTTATTTCAATGCAAAAGGATGAAAGAAATATTGTCTT
TCCAGAAAGAAAAACCGAGCATTTTTTTTTATCTTCCATACCCCTTTTAGGGTTCTATATCTCTAAACGAATAAATTGACTTCGTATGGGCATTTTACTG
GCAGCTATGGAGATAGCTGCTCTAGCTACAGTTTCAGATACTCCCCCCATTTCATAAAGTATACGACCAGGATTTACCCGGTGTGAGAT