Detailed information on CNT3067934


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670969Leersia perrieriSetaria viridis98.2519.6395.98224forward
CNT30283003Leersia perrieriChenopodium quinoa98.6823.5693.33225forward
CNT3021491Leersia perrieriCitrullus lanatus74.5654.4991.76170reverse complement
CNT30306129Leersia perrieriTriticum aestivum98.2517.9994.2224reverse complement
CNT30221833Leersia perrieriHordeum vulgare98.2516.4194.64224reverse complement
CNT30509971Leersia perrieriSolanum lycopersicum59.6510.8998.53136reverse complement
CNT30441199Leersia perrieriAegilops tauschii98.2522.5695.98224reverse complement
CNT30660235Leersia perrieriTriticum dicoccoides98.2523.895.98224forward
CNT30605146Leersia perrieriGossypium raimondii98.6814.7393.78225forward
CNT30208772Leersia perrieriHelianthus annuus101.3242.791.77231reverse complement
CNT30682696Leersia perrieriTriticum urartu98.2525.2595.98224forward
CNT30644906Leersia perrieriCannabis sativa52.6337.590120forward
CNT30320583Leersia perrieriAsparagus officinalis22.374.6590.251reverse complement
CNT30118993Leersia perrieriCitrus clementina30.719.8988.5770reverse complement
CNT30331625Leersia perrieriDioscorea rotundata24.1217.390.9155reverse complement

Expression of CNT3067934

Peptides detected in this lncRNA

>peptide 1 (33 aa)
QAGRHIPLCSQAESMLEPTFAHLRYSLGGIRPR*

Sequence

>CNT3067934
CAGGCAGGCAGGCATATACCATTATGCTCACAAGCGGAATCAATGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCATCCGCCCCAGAT
AAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGAGTGGTCTTTCAGGATTGGTCGTTGTGT
GTCACCACCGTCAAGCTATCCTACACAT