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Detailed information on CNT30679333


BLAST search results

BLAST vs Swiss-Prot:
sp|Q95H50|RK16_WHEAT, E-value = 3e-93

BLAST vs NONCODE:
NONCSAT000320, E-value = 2e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641762Triticum urartuNymphaea colorata35.910.0888.57350forward
CNT30311863Triticum urartuCamelina sativa25.9515.4987.75253forward
CNT3083474Triticum urartuBrassica juncea33.959.9185.5331forward

Expression of CNT30679333

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQKDERNIVFPERKTEHFFLSSIPLLGFYISKRIN*

>peptide 2 (45 aa)
NSLVSISPTSIYNTSGANETILVKFNSLNSSAIAPKTRVPFGLPF*

>peptide 3 (29 aa)
MIYQFSLNLIERGIISSFAGISGKKSLVIF

Sequence

>CNT30679333
TTAATTCTTTGGTCTCAATTTCGCCTACTAGTATTTATAATACTTCAGGAGCTAATGAAACTATTTTGGTAAAATTCAATTCTCTCAATTCCTCGGCAAT
CGCGCCAAAAACTCGAGTTCCTTTTGGATTGCCTTTTTGATCAATTATAACCGCAGCATTGTCATCATAGCGGATTATTACCGTCTTCGCATTTGAACTC
TTTACATGTACGTACAATTACAGCAACAATAACATCACCAATACGAGCATATCGCTGATTACCAGCAGCTCCTATGACTCGAATACACATCAATTTTCGA
GCTCCACTATTATCTGCTACATTTAAAAGGGTCTGAGGTTGAATCATATTATTTTGATTTCAATTTGTTATTTCAATGCAAAAGGATGAAAGAAATATTG
TCTTTCCAGAAAGAAAAACCGAGCATTTTTTTTTATCTTCCATACCCCTTTTAGGGTTCTATATCTCTAAACGAATAAATTGACTTCGTATGGGCATTTT
ACTGGCAGCTATGGAGATAGCTGCTCTAGCTACAGTTTCAGATACTCCCCCCATTTCATAAAGTATACGACCAGGTTTAACAACGGATACCCAATATTCG
GGGGACCCCTTTCCCGAGCCCATACGTGTTTCCGTGGGTCTTAGTGTAACCGGTTTGTCGGGAAATATACGTACCCATATTTTTCCACCACGACGTGCAT
ATCGTGTTATTGCTCTTCGTCCTGCTTCTATCTGTCTCGCCGTGATCCAAGCGGGTTCAAGTGCTTGAAGAGCATATCTACCAAAACAAATACGATTGCC
TCGGCAGGATTTTCCTTTCATTCTTCCTCTATGTTGTTTGCGAAATCTGGTTCTTTTGGGGTTATACATAGCAATTATATTAAATGATTTATCAATTTTC
ATTAAATCTTATAGAAAGAGGTATAATTTCTTCTTTTGCAGGGATTTCAGGAAAAAAGTCTCTTGTCATTTTTTA