Detailed information on CNT30679330


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36450|NDUS2_NICSY, E-value = 2e-101

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201967Triticum urartuPisum sativum42.0998.596.95197forward
CNT30491147Triticum urartuOlea europaea19.4423.6490.1191reverse complement
CNT30554303Triticum urartuOryza glaberrima44.6695.8796.65209forward
CNT3079268Triticum urartuBrassica juncea57.0598.5296.25267forward
CNT30481303Triticum urartuChara braunii86.5467.3981.48405forward
CNT3038653Triticum urartuCucumis melo10047.1397.22468forward
CNT30114308Triticum urartuFicus carica47.4413.0494.59222forward

Expression of CNT30679330

Peptides detected in this lncRNA

>peptide 1 (82 aa)
RPLNITPLNPQSFACCAVTVPISTNRCFQIRLPVDISSNSSIREANCCVEESISRHKPRGRSCATPPGRMKLACILAPGTLS*

Sequence

>CNT30679330
CGACCTCTTAACATTACACCACTGAATCCCCAATCCTTTGCTTGCTGTGCAGTGACAGTACCAATATCCACTAATCGTTGTTTCCAGATACGGTTGCCGG
TTGACATCTCTTCTAATTCGTCGATACGAGAAGCAAATTGTTGTGTGGAGGAATCAATATCTCGACATAAGCCAAGAGGCAGATCTTGTGCCACTCCACC
AGGTCGTATGAAACTGGCATGCATCCTGGCTCCCGGGACTCTTTCATAGAATTCCAACAATTTCTCCCGCTCCTCAAAAGCCCAAAGGAACGGAGTTGAT
GCTCCCACATCCATAGCATGAGTAGTTGAAGCAAGTGAATGATTTGAAATTCGAGTTATTTCACAGAATAACACTCTTATATATTGAGCTCGTAATGGTA
CCTCACAATTCAAAAGTCTCTCTACGGCTGAAGAATGAGCGTGTTCTTGGGCCATCGTAGAAACATAG