Detailed information on CNT30679308


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 8e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30384456Triticum urartuTriticum turgidum31.9139.0799.04209forward
CNT30435366Triticum urartuAegilops tauschii23.0533.19100151forward
CNT30240454Triticum urartuAvena sativa35.7366.4893.16234forward
CNT30116867Triticum urartuOryza nivara12.5234.0289.0282forward

Expression of CNT30679308

Peptides detected in this lncRNA

>peptide 1 (32 aa)
NDLLVVIACIMQAASSQLLIRSSTKIKYQQRT*

>peptide 2 (72 aa)
MVCVLSNSCWVVPAGGAGDGGGGGPDGELAAGDGAAGQAPHGDRLDGDERRHCDRAVRAYTVGVSWFWSCGVR

>peptide 3 (83 aa)
MSVEPRGVALDRWCACCRTRVGWYLRVERETAAEAGRTASLRPEMELPARPRTATGWTATSDAIAIELYVRIPWACPGSGAAGY

>peptide 4 (85 aa)
MPCQLSHAVLLSIDGVRAVELVLGGTCGWSGRRRRRRAGRRACGRRWSCRPGPARRPAGRRRATPLRSSCTCVYRGRVLVLELRGT

Sequence

>CNT30679308
AATGATCTACTAGTAGTAATTGCATGCATCATGCAAGCAGCATCTTCCCAATTACTGATACGAAGTAGTACAAAGATCAAGTATCAACAGAGGACATAGA
TAGGGCCATAGGGGGGAATCCATCAGATCCATGGTACACAAGCACGAGGCGGTGGCGCTGACGTAGGCGAGCAGGGAGCCGCCGCCGAGCAGCAGGACCT
TGAGCAGCAGCCCTCGCTTGGTGAAGGGCGCGGCGAAGGTGTTGAAGAACTTGCTCTGCAGGCCGTTGTAGGGCGACGCCGCGTCGCTGCCGTACAGGTC
CCACTGCCCCGTCGTGTTGGCGATGTCGTCCAGGTCGAAGTAGACGCTCTTCTCCCCGTACTTGGCCACCACCGCCGCCCCGCGAGCCCTGCGTTCATGC
CATGTCAGTTGAGCCACGCGGTGTTGCTCTCGATCGATGGTGTGCGTGCTGTCGAACTCGTGTTGGGTGGTACCTGCGGGTGGAGCGGGAGACGGCGGCG
GAGGCGGGCCGGACGGCGAGCTTGCGGCCGGAGATGGAGCTGCCGGCCAGGCCCCGCACGGCGACCGGCTGGACGGCGACGAGCGACGCCATTGCGATCG
AGCTGTACGTGCGTATACCGTGGGCGTGTCCTGGTTCTGGAGCTGCGGGGTACGT