Detailed information on CNT30679284


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30277508Triticum urartuChenopodium quinoa59.0321.5589.07183reverse complement
CNT30555951Triticum urartuOryza glaberrima99.0337.3995.11307reverse complement
CNT3060074Triticum urartuArabidopsis lyrata56.1330.6386.21174reverse complement
CNT30354577Triticum urartuLactuca sativa60.6521.292.02188reverse complement
CNT30149874Triticum urartuBrachypodium distachyon102.5824.6792.14318reverse complement
CNT30603960Triticum urartuOryza punctata99.0324.2994.79307forward
CNT30724340Triticum urartuLupinus angustifolius59.3523.5988.04184reverse complement

Expression of CNT30679284

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MWRKVGEMADTTGRIPLWLIGTLAGIVVIGLVGVFFYGSYSGLGSSL*

Sequence

>CNT30679284
TTTGGAAGGATACCATCCTTATAACTACCCTTGACTGTTTTTGTCTCTAGCATGACCAATTGATAAAATGTGGAGGAAAGTAGGGGAAATGGCCGATACT
ACTGGAAGAATTCCTCTTTGGCTGATAGGTACTCTAGCCGGTATTGTTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTT
CATCTCTATAGTAATCGGAGGGACCAGATTGTAAACATGAAAAAGTAGGAGCTTAGCGGGTCCTTACCCTCCTTTATCTGATTAGAGCAGAAAGGACCCG
CGGAATTTTT