Detailed information on CNT30679155


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 2e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283591Triticum urartuTriticum aestivum69.7695.1100233forward
CNT30220389Triticum urartuHordeum vulgare53.2940.7389.33178forward
CNT30240485Triticum urartuAvena sativa74.8584.7593.2250forward
CNT30655703Triticum urartuTriticum dicoccoides98.591.64100329forward
CNT30131491Triticum urartuLolium perenne79.0453.5592.8264forward
CNT30149479Triticum urartuBrachypodium distachyon69.4660.2689.66232forward

Expression of CNT30679155

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGSSRTLSSSPRLVKGAAKVLKNLLCRPL*

>peptide 2 (40 aa)
GIHQIHGTQARGERRKKALIADLLRSCHVAPGWGAAGAPS*

Sequence

>CNT30679155
GGAATCCATCAGATCCATGGTACACAAGCACGAGGCGAGAGGAGGAAGAAGGCCTTGATTGCAGATCTACTTAGATCTTGCCACGTGGCCCCGGGGTGGG
GGGCAGCTGGGGCCCCTTCTTGATGGGGAGCAGCAGGACCTTGAGCAGCAGCCCTCGCTTGGTGAAGGGCGCGGCGAAGGTGTTGAAGAACTTGCTCTGC
AGGCCGTTGTAGGGCGACGCCGCGTCGCTGCCGTACAGGTCCCACTGCCCCGTCGTGTTGGCGATGTCGTCCAGGTCGAAGTAGACGCTCTTCTCCCCGT
ACTTGGCCACCACCGCCGCCCCGCGAGCCCTGCG