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Detailed information on CNT30679018

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30292052	Triticum urartu	Triticum aestivum	96.56	59.61	98.43	701	forward
CNT30396960	Triticum urartu	Triticum turgidum	100.41	31.38	91.77	729	forward
CNT30667321	Triticum urartu	Triticum dicoccoides	98.62	23.51	92.18	716	forward
CNT30719891	Triticum urartu	Triticum spelta	23.55	33.53	83.04	171	forward

Expression of CNT30679018

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDEEVAGAPSMPKNIVDARPRERAILYRS*

>peptide 2 (63 aa)
MPPFPSWTKQIRWRRWGPAGRAVGWVQRRFAGMPPEVVEAHIKTGGRCTLVRQRFKAQQQTYG*

>peptide 3 (30 aa)
MHTRQTEIQGTTTNLWMKKSRELLPCRRTS*

Sequence

>CNT30679018
GCCTTATCCGCCGCGGACGCTTCGAGCTAGTACCATTATTCCACTAAGCTGAGCTTCGTGAGAGAGAGAGGATTCGAGAAAGTGAGGTCCGCCGTCCGGC
GGTCCAGGCTCGTGGTCGTGGCCAGCGATAGAGAGGGAGCAGCGGCTGCTGCAGGTGCTGCCGCTGCCTGACTCCGGCGCGCCCAAGCCCCGGCCGAGGC
TGGAGTAGCTGCTCTGGCATGCCGCCGTTCCCCTCCTGGACCAAGCAGATCCGTTGGAGAAGGTGGGGACCTGCAGGGCGTGCAGTCGGCTGGGTGCAGC
GCCGCTTCGCCGGGATGCCGCCGGAGGTCGTCGAGGCGCACATCAAGACGGGAGGCCGATGCACACTCGTCAGACAGAGATTCAAGGCACAACAACAAAC
CTATGGATGAAGAAGTCGCGGGAGCTCCTTCCATGCCGAAGAACATCGTAGATGCTCGTCCACGTGAGAGGGCAATTCTCTATCGATCCTGATCTATTCT
CGTCTCATCCACAATGGAGTAGATAGATAGAAGAAAGGGTGTTGGAGATTTTGGCGGCAGTCTGTTGATACGCGGGAGAAAGAAAGGCAGTTTTGCTGAT
TTTCTGTAATTAGAGATATACGATCTGGTGGGTTGTTTGAGTGATGGGTCCACCAAGCCACGTGTTGGCCGCTGGTTGACCCTGCACGATAGTGCGTGCA
GGGATCCCAGCAGGAGAGCCCGACCC