Detailed information on CNT30678866


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 7e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693422Triticum urartuOryza sativa20.4818.0585.16128forward
CNT3010986Triticum urartuZea mays11.5222.2987.572forward
CNT30368187Triticum urartuSorghum bicolor11.0428.1688.4169forward
CNT30576447Triticum urartuOryza barthii12.962785.1981forward
CNT30582663Triticum urartuEchinochloa crusgalli11.0425.1888.4169forward

Expression of CNT30678866

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MSVEPRGVALDRWCACCRTRVGWYLRVERETAAEAGRTASLRPEMELPARPRTATGWTATSDAIAIELYVRIPWACPGSGAAGY

>peptide 2 (71 aa)
MVCVLSNSCWVVPAGGAGDGGGGGPDGELAAGDGAAGQAPHGDRLDGDERRHCDRAVRAYTVGVSWFWSCGV

>peptide 3 (85 aa)
MPCQLSHAVLLSIDGVRAVELVLGGTCGWSGRRRRRRAGRRACGRRWSCRPGPARRPAGRRRATPLRSSCTCVYRGRVLVLELRGT

Sequence

>CNT30678866
TCCCAATTACTGATACGAAGTAGTACAAAGATCAAGTATCAACAGAGGACATAGATAGGGCCATAGGGGGGAATCCATCAGATCCATGGTACACAAGCAC
GAGGCGAGAGGAGGAAGAAGGCCTTGATTGCAGATCTACTTAGATCTTGCCACGTGGCCCCGGGGTGGGGGGCAGCTGGGGCCCCTTCTTGATGGGGAGC
AGGACCTTGAGCAGCAGCCCTCGCTTGGTGAAGGGCGCGGCGAAGGTGTTGAAGAACTTGCTCTGCAGGCCGTTGTAGGGCGACGCCGCGTCGCTGCCGT
ACAGGTCGAAGTAGACGCTCTTCTCCCCGTACTTGGCCACCACCGCCGCCCCGCGAGCCCTGCGTTCATGCCATGTCAGTTGAGCCACGCGGTGTTGCTC
TCGATCGATGGTGTGCGTGCTGTCGAACTCGTGTTGGGTGGTACCTGCGGGTGGAGCGGGAGACGGCGGCGGAGGCGGGCCGGACGGCGAGCTTGCGGCC
GGAGATGGAGCTGCCGGCCAGGCCCCGCACGGCGACCGGCTGGACGGCGACGAGCGACGCCATTGCGATCGAGCTGTACGTGCGTATACCGTGGGCGTGT
CCTGGTTCTGGAGCTGCGGGGTACG