CANTATAdb - search

Detailed information on CNT30678864

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30286154	Triticum urartu	Triticum aestivum	87.01	42.38	97.96	442	forward

Expression of CNT30678864

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MPQILLKERGALGNTDTGGAWLSSARAVRCWVKSHNERNPHV*

>peptide 2 (30 aa)
MRPSHHAPYALGDTRATMGGTKGRDLARVS*

Sequence

>CNT30678864
GGAGCATGTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCAAATCCTCTTGAAAGAGAGGGGTGCCCTCGGGAACACGGAC
ACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCTCACAACGAGCGCAACCCTCATGTTTAGTTGCCACTATTGAGTTTGG
AACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGATGAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGC
GGGACAAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGC
TAGTAATCGCCGGTCAGCCATACGGCGGTGAATCCGTTCCCGGGGCTTGACATGCCATGAATCCTCTAGAAAGAGAGGGGTGCCCTTGAGAACGCGGACA
CAGGTGGT