Detailed information on CNT3067881


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616300Leersia perrieriSesamum indicum23.516.0288.5187forward
CNT30251534Leersia perrieriAvena sativa31.8923.9494.07118reverse complement
CNT30142453Leersia perrieriLolium perenne36.4943.5591.85135forward
CNT30711Leersia perrieriZea mays33.2451.0494.31123forward
CNT30128643Leersia perrieriCorymbia citriodora21.8924.7786.4281forward
CNT30715436Leersia perrieriMalus domestica golden17.572086.1565reverse complement
CNT30558076Leersia perrieriPanicum hallii27.849.6489.32103forward

Expression of CNT3067881

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLLVIPLSSAQFQCGLFGWKRLGKQRPLFIVRSARLASWRPRREG

>peptide 2 (81 aa)
IRAPFDGLNPTTQRIKSKGQNCKKAQEFFQERSCCCCSPLFSIYCQEELGHISLETRRWEWRAKAMEEECGTLALCDICCS*

>peptide 3 (31 aa)
MWFVWVEEARQAAAAIYSPLRSPRKLETETGG

Sequence

>CNT3067881
CATTAGAGCTCCCTTCGATGGATTGAACCCAACAACTCAAAGAATCAAATCAAAAGGCCAAAATTGCAAGAAAGCTCAAGAATTTTTTCAGGAGCGATCT
TGTTGTTGTTGTTCCCCCCTTTTTTCTATCTATTGCCAGGAGGAGCTGGGGCACATCTCACTGGAGACGAGGAGATGGGAATGGAGGGCGAAGGCTATGG
AGGAGGAGTGTGGGACGCTGGCCCTCTGTGACATATGCTGCTCGTGATTCCTCTTTCCTCGGCTCAATTCCAATGTGGTTTGTTTGGGTGGAAGAGGCTC
GGCAAGCAGCGGCCGCTATTTATAGTCCGCTCCGCTCGCCTCGCAAGCTGGAGACCGAGACGGGAGGGAG