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Detailed information on CNT30678773


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41803|EF1A_MAIZE, E-value = 4e-60

BLAST vs NONCODE:
NONCQUT008675, E-value = 7e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30680463Setaria viridisTriticum urartu74.0163.1487.21430forward

Expression of CNT30678773

Peptides detected in this lncRNA

>peptide 1 (36 aa)
ESNFTANRNAVYHSPIAFRIIISTSKTQKRYTTFKT*

>peptide 2 (52 aa)
MTPTATVCLMSRTAKRPRGGYSENVSTTMGLMTPVSTRPTGTVPIPPILYTS*

Sequence

>CNT30678773
AGGAATCAAATTTCACAGCCAATAGAAACGCAGTATATCATTCACCCATTGCATTCAGAATCATAATAAGTACTTCAAAGACACAAAAGAGGTATACCAC
GTTCAAGACTTAGATCAACACTACTGGATAATTGGAGCAAACTATCAAACGCCTCATTTCTTCTTGGCAGCAGCCTTGGTAACCTTGGCACCGGTGGGGT
CCTTCTTCTCCACGCTCTTGATGACACCAACAGCAACCGTCTGCCTCATGTCACGAACAGCAAAGCGACCAAGAGGAGGGTACTCAGAGAATGTCTCCAC
AACCATGGGCTTGATGACACCAGTCTCTACACGACCAACAGGCACAGTTCCAATACCACCAATCTTGTACACATCCTGAAGGGGGAGACGCAGGGGCTTG
TCCGAAGGCCTCTTTGGCTCATTGATCAAGTCAAGAGCCTCAAGCAGTGTTGGGCCCTTGTACCAGTCCAGGTTGGTGGACCTCTCAATCATGTTGTCGC
CCTCGAAACCAGAGATGGGAACAAAGTGAATCTTGTCAGGGTTGTATCCAACCTTCTTGAGGTACGAAGAGACTTCCTTCA