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Detailed information on CNT30678663


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618174Setaria viridisSesamum indicum19.3324.0787.5104forward
CNT30444717Setaria viridisSaccharum spontaneum47.448.0292.16255forward
CNT30481833Setaria viridisChara braunii25.8447.1286.33139forward

Expression of CNT30678663

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MPSPTYQCTKARLAYMRSNLRSMRENTSATLVELEIMHTARCTLAREEGAERIDRSGVEGERWRL*

Sequence

>CNT30678663
AGATGGAACCAACAGTAATTAACCGAGATACTGATTCCATTACAACATGGTATTAAAGCAGTTCAACAAGCAACGGTGAAGCAAACACCAACATAACAAA
CAGCCCAAGAGGCAATATCAAAAGAGTTTTCGACACCGCGACAGATGTCATCCACAGATTGACGACACAACCGATACCTGCAAGCCGATCACGATCAGTA
CTCCTCGTCCTCCTCATCATCGTCACCACCGCCCTCAGCGCCGACCTCCTCGTAGTCCTTCTCCAGGGCCGCCAGGTCCTCACGGGCCTCGGAGAACTCC
CCCTCCTCCATGCCCTCGCCGACATACCAGTGCACAAAGGCGCGCTTGGCATACATGAGGTCGAACTTGCGGTCGATGCGGGAGAACACCTCAGCGACGC
TGGTGGAGTTGGAGATCATGCACACAGCGCGCTGCACCTTGGCGAGGGAAGAGGGAGCGGAGCGGATCGATCGATCGGGAGTGGAAGGGGAGCGCTGGCG
TTTGTGAAGACGCCGAGGTGAGGAGAGGGGAGGCGGCC