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Detailed information on CNT30678636


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30446045Setaria viridisSaccharum spontaneum24.5323.1291.392forward
CNT30558853Setaria viridisPanicum hallii44.5346.6588.02167forward

Expression of CNT30678636

Peptides detected in this lncRNA

>peptide 1 (52 aa)
CEQKPCSLFSSHFFSLRKQLGNGKHGEPTPNRTVTRDTKLGISNGNTMLIDS*

>peptide 2 (33 aa)
ANKNLAHSFLLISFHCGNNLGTVNMGNQHLIER*

Sequence

>CNT30678636
TGCGAACAAAAACCTTGCTCACTCTTTTCTTCTCATTTCTTTTCATTGCGGAAACAACTTGGGAACGGTAAACATGGGGAACCAACACCTAATAGAACGG
TAACACGGGACACTAAACTCGGGATCTCGAACGGTAACACGATGCTAATAGATAGCTAGGATAACTTGGCTGCTGCCTGCACGGGAGGGCCCACTCCGTC
AGAGGCGAAGGCAAGCTGGAGGGACTCGCTGTCGGTGGCCCATGCGAGGCCGCCGACGAAGCAACGGTACTCCACGTCCGCCGCCGCCATCTCCCTTCTT
CTCCCACTGAAAAACCCTAAAGCCGAAGACTTGGTAAGAGTGGGAGGAGTAGCCAACCCACCTCTGAGAGAGCAC