Detailed information on CNT30678577


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30704384Setaria viridisPrunus avium20.2912.5785.7170forward
CNT3040646Setaria viridisMarchantia polymorpha19.1321.2992.4266forward

Expression of CNT30678577

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MWIEMHSLMVSSEGWCGGDGGGGREWEDGESFESRERRVRRRLPLRCSA

Sequence

>CNT30678577
ATAGGAGCCACTCGGGCAGATCATAGGATAACCGCGGCACACAGGCCTGACACAGCAGCAGGAAGCATCGTCTAGTACTCGTCACCCTCGTCTCCTTCCT
CGCCCTCGTCGAACTCAGCGCCGACCTCCTCGTAGTCCTTCTCGAGCGCAGCCAGAGCTCCCAGCACGCGTTTCCGACCTGTATACCGGCCTGGCCGATG
TGGATCGAGATGCACTCCCTCATGGTGTCGTCGGAAGGGTGGTGCGGCGGCGACGGCGGCGGCGGTAGGGAATGGGAGGACGGGGAAAGCTTTGAGTCGC
GAGAGAGGCGAGTACGAAGACGCCTTCCTCTGCGGTGCTCGGCTT