Detailed information on CNT30678225


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30491951Setaria viridisOlea europaea23.089.7789.3375reverse complement
CNT30331560Setaria viridisDioscorea rotundata54.1534.8593.75176forward
CNT30174498Setaria viridisVigna angularis66.4642.7792.59216forward

Expression of CNT30678225

Peptides detected in this lncRNA

>peptide 1 (43 aa)
TPKSPHRREGLAPRCRLFATWSCRWFQGLGCSPINASIERTFP*

>peptide 2 (74 aa)
PPRVHIDGKVWHLDVGSSPPGAVGGSKGWAVRPLMRALRGPFPSTRRPGRTHLWCTSYRAYGKRWVAKCGEDNC*

Sequence

>CNT30678225
ACCCCCAAGAGTCCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGAGCTGTAGGTGGTTCCAAGGGTTGGGCTGTTCGCCCA
TTAATGCGAGCATTGAGAGGACCTTTCCCTAGTACGAGAAGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCTACGGTAAACGCTGGGTAG
CCAAGTGTGGAGAGGATAACTGCTGAAAGCATATAAGTAGTAAGCCCACCCTAAGATGAGTACTGTCTCCTCCGACTTCCCTAGAGCCTCCGGTAGCACA
GCCGAGACAGCGACGGGTTCTCGGC