Detailed information on CNT30678161


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202348Setaria viridisPisum sativum28.1119.1583.65104reverse complement
CNT30219816Setaria viridisHordeum vulgare50.549.3885.56187reverse complement
CNT30368556Setaria viridisSorghum bicolor28.1120.9392.31104reverse complement
CNT30103614Setaria viridisOryza rufipogon50.8127.1384.57188reverse complement

Expression of CNT30678161

Peptides detected in this lncRNA

>peptide 1 (43 aa)
YHPLKTHKYQNELIPFNFTKGKKGAAPITMAKLSFFSNFYFFK*

>peptide 2 (32 aa)
MFNGIISYPKGLGPLLTAQWNLYAQNPDSSNKF

Sequence

>CNT30678161
TTTATCACCCATTAAAAACACACAAATACCAAAATGAACTGATTCCGTTCAATTTCACTAAGGGTAAAAAAGGAGCGGCCCCAATCACGATGGCAAAATT
GTCATTTTTTAGCAATTTTTATTTCTTTAAATAATCAAATCTTCTATAAAGAGTACATGCAAGGGGGGGCAACCCTATCATTTGAGTGAAGTGTCAGGAC
TTTTGGGGGTAAGTTCTTTGGCTTGGACAGGACATTTAGTTCATGCTGCTATTCCCGGATCCAGGGGGAGTATGTTTAATGGAATAATTTCTTATCCCAA
GGGGTTGGGTCCCCTTCTGACGGCTCAGTGGAATCTTTATGCCCAAAATCCTGATTCGAGTAATAAATTT