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Detailed information on CNT30678132


BLAST search results

BLAST vs Swiss-Prot:
sp|P14641|TBA2_MAIZE, E-value = 9e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721658Setaria viridisTriticum spelta33.8958.3192.56242forward

Expression of CNT30678132

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MRSNLWSMRENTSTTLVETWGDGYTVNPSLDFLP*

>peptide 2 (47 aa)
RCCKRHTTTDNSSNRHTDTQQDKIGATRADHRITAAHRPDTAAGSIV*

>peptide 3 (30 aa)
MLPSTSLTEEGVESIITSSNGLVAGHLAISL

Sequence

>CNT30678132
TAAGATGTTGTAAACGACATACGACGACAGATAACAGTTCAAACCGACACACCGACACACAACAAGATAAGATAGGAGCCACTCGGGCAGATCATAGGAT
AACCGCGGCACACAGGCCTGACACAGCAGCAGGAAGCATCGTCTAGTACTCGTCACCCTCGTCTCCTTCCTCGCCCTCGTCGAACTCAGCGCCGACCTCC
TCGTAGTCCTTCTCGAGCGCAGCCAGGTCCTCACGGGCCTCAGAGAACTCGCCCTCCTCCATGCCCTCACCCACGTACCAGTGAACGAAGGCACGCTTGG
CGTACATGAGGTCAAACTTGTGGTCGATGCGGGAGAACACCTCGACCACGCTGGTGGAGACCTGGGGAGATGGGTACACAGTGAACCCGAGCTTGGACTT
CTTGCCATAGTCAACAGACAGACGCTCAAGGAGGAGAGAACCAAGACCAGAGCCTGTTCCTCCACCAACAGCATTGAAGACAAGGAAGCCCTGGAGACCA
GTGCAGTTGTCGGCAAGCTTCCTGATGCGCTGCTCAGGGTGGAAGAGCTGGCGGTAAGTACCAGTCCTCACCTCATCAATCACAGTGGGCTCAAGGTCAA
CAAAAACAGCACGGGGCACATGCTTCCCAGCACCAGTCTCACTGAAGAAGGTGTTGAAAGCATCATCACCTCCTCCAACGGTCTTGTCGCCGGGCATCTG
GCCATCAGCCTGAA